Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02428 ATGGCTTTTATCTCTGAGGTAAACATGAGCTATTCTCAGTCTCACTACATGGATGATGAATATGAAAAACTCTTCAGAAGAATGAACCCTCCTAGAGTTGTAATTGATAATGAATCTTGCAAGAATGCCACTGTTATAAGGgttGATAGTGCAAACAAACAAGGAATACTTCTTGAAGTTGTTCAAATCCTCACTGATCTAAATCTCATCATTCTTAAGGCTTACATATCTTCTGATGGTGGATGGTTTATGGATgTTTTTAATGTAACTGACCAAGATGGAAACAAGGTCACAGATGAAGTCATTTTGGATTACATTAGAAAGTCTCTTGGTCCTGAATCTTGCTTTCCATCTACTATGAGATCTGTTGGTGTTAAACAAACAATGGACCATACTGCGATAGAGCTTATGGGAAGTGATAGGCCGGGATTGTTATCAGAAGTTAGCGCTGTTCTCACGAACCTCAAATGTAACATAGTGAATGCCGAGGTTTGGACTCACAACATGCGTGCAGCCGCTGTAATGCATGTGACTGATGAGGAAACCAGTTCTGCTATAACCGACTCTCAGAGGCTTTCACTAATCAAGGAGCTTCTATGCAATGTGCTTGGTGGTGGAAATAGGAAAAGGGGTGCCAAGACTGTTGTTACTGATGATTCAACGCATACTGATAGAAGACTTCATCAGATGATGTTTGATGATAGGGATTACGAACGCGTTGACGACGATGACTTTGATGAGAAACAAAGACCAAATGTTGATGTTGTGAATTGGTCTGATAAGGATTATTCTGTTGTTACTATTGAATGTAAGGATCGGCCGAAGCTTTTGTTCGACACGGTTTGTACTTTAACAGATATGCAATATGTGGTTTTTCATGCCAATATTGATGCTGAGGGGCCACAAGCATATCAGGAATATTACATCAAGCATATAGATGGATCTCCTGTAAAATCAGATGCAGAAAGACAAAGAGTGATACATTGTCTTGAAGCTGCAATTGAGAGAAGAGTTTCTGAGGGTTTGAAGCTAGAACTATGCACCACCGACAGAGTTGGATTATTATCAAATGTGACACGTATCTTTAGAGAGAATAGTCTCACAGTAACAAGAGCAGAAGTAACAACAAAAGGAGGAAAAGCTGTTAACACTTTCTATGTTCGTGGTGCTTCTGGTTGTAATGTTGATTCTAAGACCATTGAATCCATTAGACAAACAATTGGTAACACAATACTAAAAGTCAAGGGTAGTTCTGAATCTGTACCTCAAGATTCTCCTACAAGATCTTCTATCTTTAGTGGTCTTTTCAAGTCTAGATCTTTTGTTAACTTTGGTTTGGTTAAATCTTACTCTTGA 1356 0.3842 MAFISEVNMSYSQSHYMDDEYEKLFRRMNPPRVVIDNESCKNATVIRVDSANKQGILLEVVQILTDLNLIILKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFPSTMRSVGVKQTMDHTAIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETSSAITDSQRLSLIKELLCNVLGGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYERVDDDDFDEKQRPNVDVVNWSDKDYSVVTIECKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKHIDGSPVKSDAERQRVIHCLEAAIERRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVTTKGGKAVNTFYVRGASGCNVDSKTIESIRQTIGNTILKVKGSSESVPQDSPTRSSIFSGLFKSRSFVNFGLVKSYS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02428 451 Pfam ACT domain 134 186 IPR002912 -
Tsu05g02428 451 Gene3D - 128 201 - -
Tsu05g02428 451 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 8 449 - -
Tsu05g02428 451 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 8 449 IPR040217 -
Tsu05g02428 451 ProSiteProfiles ACT domain profile. 133 220 IPR002912 -
Tsu05g02428 451 CDD ACT_ACR_3 263 337 - -
Tsu05g02428 451 CDD ACT_ACR_1 43 113 - -
Tsu05g02428 451 ProSiteProfiles ACT domain profile. 45 122 IPR002912 -
Tsu05g02428 451 SUPERFAMILY ACT-like 128 187 IPR045865 -
Tsu05g02428 451 ProSiteProfiles ACT domain profile. 343 419 IPR002912 -
Tsu05g02428 451 SUPERFAMILY ACT-like 339 408 IPR045865 -
Tsu05g02428 451 SUPERFAMILY ACT-like 40 108 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02428 Tsu-Chr5 32565163 32569644 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02428 05 32565163 32569644 Tsu05g02428 05 32565163 32569644 ECH