Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02278 ATGGCGCTCACAGCAATGCTGGGACACACTGCATTTCCAAAACTCTCTACTTCCTTTAATGGCGAAGCatcactttcttcttcaaattctcCTTCTTTTATGGGTTCTCCTCTTAGCCTCTCACTTTCTACTACGTTTCCCGGAAACCAATCAATTTCTAGAAAGAAATTTGTGGTTTTTGCTGCGAAGATGTCAAGGTTGGAGGAAGCCATGAAAATCAGGAGAGAACGTGACCTTCAGGTTGTGAAGAAGGATAGAAAATATCGTCCATTAAGGCGTGGAAAAGTATCGCCACGTCTACCTGTTCCTGATGATATACTAAGGCCTCCTTATGTAGGCTCAGATATACTTCCAGAGATTACAAGTGAATATCAAATTCATGATTCTGAAGGTATAGCTAAAATGAGGGCTGCAGGTGAGCTTGCAGCACGTGTCTTAAACTTTGCAGGAACTTTGGTTAGGCCTTCTGTGACAACTAATGAAATTGATAAAGCAGTGCACCAAATGATAATTGATGCTGGTGCTTATCCCTCACCCCTTGGCTATGGTGGGTTTCCTAAAAGTGTATGCACATCAGTTAATGAGTGTATGTGCCATGGGATACCTGATTCTCGGCAGTTACAGAATGGTGATATTATCAACATTGATGTTACAGTCTACCTGAATGGATATCATGGAGACACATCAAGGACATTTTTATGTGGGGAAGTCAGCGATGCAATGAAACACCTTGTTAAGGTAAGTGAAGAGTGCTTGGAGAAAGGAATAGCCGTTTGCAAGGATGGTGCTCCTTTTAAGAAAATTGGAAAGAGAATCAGCGAGCATGCAGAAAAGTATGGCTACGGCGTAGTGGAACGTTTTGTTGGGCATGGTGTTGGAACAGTGTTTCATTCTGAGCCAATAATTAATCATCATCGCAATGACGAAGGAGGTTGCATGGTTGAAGGTCAAACATTTACAATTGAGCCTATTCTTACAATGGGAAGCATTGATTGCATTACATGGCCTGACAATTGGACAGCAGTTACATATGATGGCAGTCCGGCAGCACAGTTTGAGCATACCCTTTTGATAACTAAGACGGGAGTTGAAATTTTAACTACATGTTGA 1110 0.4117 MALTAMLGHTAFPKLSTSFNGEASLSSSNSPSFMGSPLSLSLSTTFPGNQSISRKKFVVFAAKMSRLEEAMKIRRERDLQVVKKDRKYRPLRRGKVSPRLPVPDDILRPPYVGSDILPEITSEYQIHDSEGIAKMRAAGELAARVLNFAGTLVRPSVTTNEIDKAVHQMIIDAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQNGDIINIDVTVYLNGYHGDTSRTFLCGEVSDAMKHLVKVSEECLEKGIAVCKDGAPFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSEPIINHHRNDEGGCMVEGQTFTIEPILTMGSIDCITWPDNWTAVTYDGSPAAQFEHTLLITKTGVEILTTC 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02278 369 SUPERFAMILY Creatinase/aminopeptidase 83 368 IPR036005 -
Tsu05g02278 369 PRINTS Methionine aminopeptidase-1 signature 189 202 IPR001714 -
Tsu05g02278 369 PRINTS Methionine aminopeptidase-1 signature 211 227 IPR001714 -
Tsu05g02278 369 PRINTS Methionine aminopeptidase-1 signature 281 293 IPR001714 -
Tsu05g02278 369 PRINTS Methionine aminopeptidase-1 signature 311 323 IPR001714 -
Tsu05g02278 369 TIGRFAM met_pdase_I: methionine aminopeptidase, type I 126 368 IPR002467 GO:0006508|GO:0070006
Tsu05g02278 369 PANTHER METHIONINE AMINOPEPTIDASE 33 368 - -
Tsu05g02278 369 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 287 305 IPR002467 GO:0006508|GO:0070006
Tsu05g02278 369 Gene3D Creatinase/methionine aminopeptidase superfamily 87 369 IPR036005 -
Tsu05g02278 369 PANTHER METHIONINE AMINOPEPTIDASE 33 368 - -
Tsu05g02278 369 Hamap Methionine aminopeptidase [map]. 124 369 IPR002467 GO:0006508|GO:0070006
Tsu05g02278 369 CDD MetAP1 132 367 IPR002467 GO:0006508|GO:0070006
Tsu05g02278 369 Pfam Metallopeptidase family M24 134 360 IPR000994 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02278 Tsu-Chr5 29747143 29754944 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02278 05 29747143 29754944 Tsu05g02278 05 29747143 29754944 ECH