Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02277 atgGCATCCATGTCTTCTTTGAAAATGATTTCTTCCCCCAAACTTTCCTACTCAAGTTCTATCTCTCCTCTTCAAACCCAAAATCAACTActttcttctaggttctctcTATCCTTCCCAAGTAAAAATTTCAACACTTCAACCACCCAACAAGTATCTACTACATCCACAAAAAGAACTTCAAAGAACTCCACAACCACTGCATTCTTCTTCAATAAGCAAAAGGAACATCAAGAAACTTCAAAGCCAGCTAAAGTTCAAGAACTATCTGTGTATGAGATCAATGAACGTGACAGAGGAAGTCCTGCATATCTTAGACTAAGTCAAAAATCAACAAACTCTCTTGGAGATTTAGTACCATTCAGCAACAAACTCTACTCAGGAAACTTAGAGAAAAGGCTAGGAATAACTTCAGGCTTATGTATACTGATCCAACATGAACCTGAGAAAAAGGGTGACAGATATGAAGCTATTTACAGCTTCTACTTTGGGGACTATGGTCACATAGCAGTTCAAGGACCTTATTTAACATACCAAGATACATATCTAGCTGTTACAGGAGGTTCTGGAATCTTTGAAGGTGTTTCTGGACAAGTTAAACTTCAACAACTTGTGTTCCCATTTAAGCTATTTTACACTTTTTACTTAAAGGGTATTCCTGATTTGCCAGCTGATTTACTTGGAAAGCCTGTTGAACCATCACCAAGTGTTGAACCTTCTCCTGCTGCTAAGGCTACTGAGTCTCATGCTTGTTTACCAAACTTCACCAACTAA 774 0.3695 MASMSSLKMISSPKLSYSSSISPLQTQNQLLSSRFSLSFPSKNFNTSTTQQVSTTSTKRTSKNSTTTAFFFNKQKEHQETSKPAKVQELSVYEINERDRGSPAYLRLSQKSTNSLGDLVPFSNKLYSGNLEKRLGITSGLCILIQHEPEKKGDRYEAIYSFYFGDYGHIAVQGPYLTYQDTYLAVTGGSGIFEGVSGQVKLQQLVFPFKLFYTFYLKGIPDLPADLLGKPVEPSPSVEPSPAAKATESHACLPNFTN 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02277 257 MobiDBLite consensus disorder prediction 231 257 - -
Tsu05g02277 257 Gene3D - 71 257 IPR044859 -
Tsu05g02277 257 PANTHER ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC 2 257 - -
Tsu05g02277 257 Pfam Allene oxide cyclase 82 255 IPR009410 GO:0016853
Tsu05g02277 257 SUPERFAMILY Allene oxide cyclase-like 85 257 IPR034871 GO:0009695|GO:0046423
Tsu05g02277 257 PANTHER ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC 2 257 IPR009410 GO:0016853
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02277 Tsu-Chr5 29736720 29738173 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02277 64 257 Acyl Lipid Metabolism Gene Families AT3G25780 65.816 3.25e-91 268
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02277 05 29736720 29738173 Tsu05g02277 05 29736720 29738173 ECH