Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01993 ATGGTTTCCATATTCTGCGATGTGTTTCCCTATTTATTCAGAACTAGAAATAGGAGTCCAATATCAGTATCAATAGTGGTCTTGGATGAAGCACACAGCAGCCCTGGGTTGCATGCTGCAGCTGGACCTGGTCTTGCAGAAGAATGTGCAACTTTGGGTGGATGTCGAACAGGGATGGCTAAAATTTCCAATGCCTACGATCTTCCTGCAAGGAAAGTTATCCATACAGTTGGTCCGAAGTATGCTATGAAGTACCACACTGCTGCAGAGAATGCTTTAAGTCATTGCTATCGTTCTTGCCTGGAGCTTCTAATTGAAAATGGACTTCGAAGCATTGCTATTGGATGTATTTATACAGAAGCAAAGAACTATCCCCGTGAACCAGCTGCACATGTAGCTATAAGAACTGTGCGGCGGTTTCTTGAGAAGCAGAAAGACAATGTAACAGCTGTTGTCTTTTGCATTACCAGCATAATTGATACCGAGATATATAAAAGGTTACTTCCACTTTACTTTCCTCGGGATAAACACGAGGAGGAGGTGGCTATGTCAAAGCTTCCTGCAGATGTTGGGGATGAGAATGGTGAGACTACAATTGATGAGCGTAAAATCAGAATAAAGCCTTTGCCTAAAAATAAGGTTCCAAAACCTCCTAGAGAACCAGTTGATCTTCCTGTTAGCGATGTTGGCAATGTTCGCAGgACTTCATCGTATAATTCATTTTTAGATCCTGCCTTCATGTCTTTGATTAAAGACCCTGATGAAAGACGTCTGGAGCAGTGGGAGAAAACTGTTCAAGCACAACGAGGGTGGAATTTTGCTAATTTTCTTGGATTCGGTGACCTAGGTGGACCTCCATTGTCTGCCGCTGAAGAATATTCTTTGCACTCCAGATATCTTTCTAAAGCAAAATCCTTAAATCTATCTGAAATTGCAGAAATGAAGATTGTCTATCGTGGAGGGGTGGACAGTGAGGGTCGTCCCGTCATGGTTGTTGTTGGGGCTCACTTTTTGCTCAGATGTCTTGATTTGGAGCGATTTGTGCTTTATGTGTTGAAGGAGTTCGAGCCAATAATACAGAAGCCTTATACTATTGTATACTTTCATTCTGCTGCATCTTTGCAAGTGTAA 1131 0.4218 MVSIFCDVFPYLFRTRNRSPISVSIVVLDEAHSSPGLHAAAGPGLAEECATLGGCRTGMAKISNAYDLPARKVIHTVGPKYAMKYHTAAENALSHCYRSCLELLIENGLRSIAIGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDNVTAVVFCITSIIDTEIYKRLLPLYFPRDKHEEEVAMSKLPADVGDENGETTIDERKIRIKPLPKNKVPKPPREPVDLPVSDVGNVRRTSSYNSFLDPAFMSLIKDPDERRLEQWEKTVQAQRGWNFANFLGFGDLGGPPLSAAEEYSLHSRYLSKAKSLNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVLKEFEPIIQKPYTIVYFHSAASLQV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01993 376 SUPERFAMILY Macro domain-like 37 201 IPR043472 -
Tsu05g01993 376 Gene3D - 306 376 IPR036865 -
Tsu05g01993 376 Gene3D Leucine Aminopeptidase, subunit E, domain 1 27 177 IPR043472 -
Tsu05g01993 376 SUPERFAMILY CRAL/TRIO domain 308 362 IPR036865 -
Tsu05g01993 376 Pfam Divergent CRAL/TRIO domain 326 372 IPR001251 -
Tsu05g01993 376 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 26 376 - -
Tsu05g01993 376 CDD SEC14 314 369 IPR001251 -
Tsu05g01993 376 CDD Macro_GDAP2-like 28 171 IPR035793 -
Tsu05g01993 376 ProSiteProfiles Macro domain profile. 1 172 IPR002589 -
Tsu05g01993 376 SMART YBR022w_8 12 133 IPR002589 -
Tsu05g01993 376 MobiDBLite consensus disorder prediction 209 228 - -
Tsu05g01993 376 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 26 376 - -
Tsu05g01993 376 Pfam Macro domain 37 133 IPR002589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01993 Tsu-Chr5 23027310 23037270 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01993 05 23027310 23037270 Tsu05g01993 05 23027310 23037270 ECH