Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01988 ATGGTGCAAGGTGTGTCATTTAGCACTCTAGCAACATGTGGAAAGAGCAGAATCTATGGTTCATCTCATTCTTGGATGACACCCTTTGAGCCATTTAAAAGATCTCATATTACATCTTCCACCGGAAAACACGTGGTTTGGAACAAGTGTGTGCCGAGCTTGGTCATAATTGGGTACCCTTTTGTGTCGAGGCAAAGTAGTGGTTTTAAAGTTGAAGCAGGATGGATGTTTAGAGGGGGAGAGCAAGGTTTGGATGCAAGTGTAGAGCAAAGTGAAAGTGCTAATGAGGATATCTTGATGTTCTTCTTTCAGCTGGATTTAGCGACAAGAGTGCAGTGTGCGTTAAACATGGAAGAGTATGACATTGCAAAGCAGCTGCGAAACAAACTTTCTGAGGTTGAAGAAGAGGTTATTAAGCAACAACAGTCAAAAAGGGGAATGTCTGCAAAAAGTGAAGCTCAAGATAAAGCTCTAAGTATTATACGTCTTCGTTCAGACCTTCAGAGTGCTATCGAAAATGAAGATTATGCCTTGGCTGCTAAATTACGTGATGAAATTTCCAAACTTGAAGCTGAGTCTCTAGCTGCATCAGCTAAAGCTTTAGCACATGAAAATGCACAATATGTGTTTCGCTTGGGGCAGAAAGTGAGGCATAAATTATTCGGCTATAGAGCTATAATTGTAGGAATGGATCCAGTATGCAGTGAATCGAATTCATGGATGGAAAATGCACAGGTTAAGAAGTTGGCGCGTGGTTCCACACAGCCGTTTTATCAGGTTCTTGTTGACGTACGTGCTGAACCAGATCTACTGGTGGCGTATGTTCCAGAGGAAAATCTTTTAACACCTGACAAACCAGACAAAGGAAGGTTTGATCACCCCTACATGTCTTTTCTGTTCTACGGAATGGATTCAGCTGGAGATTTCATCCCTATTAAGCAACTTCGGGAGAAGTACAATAAACCACGCCATGAAATACCCTTTGACCCACCAACTGATGAAGATGGAGGAAAAGCTTAA 1020 0.4196 MVQGVSFSTLATCGKSRIYGSSHSWMTPFEPFKRSHITSSTGKHVVWNKCVPSLVIIGYPFVSRQSSGFKVEAGWMFRGGEQGLDASVEQSESANEDILMFFFQLDLATRVQCALNMEEYDIAKQLRNKLSEVEEEVIKQQQSKRGMSAKSEAQDKALSIIRLRSDLQSAIENEDYALAAKLRDEISKLEAESLAASAKALAHENAQYVFRLGQKVRHKLFGYRAIIVGMDPVCSESNSWMENAQVKKLARGSTQPFYQVLVDVRAEPDLLVAYVPEENLLTPDKPDKGRFDHPYMSFLFYGMDSAGDFIPIKQLREKYNKPRHEIPFDPPTDEDGGKA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01988 339 Pfam UvrB/uvrC motif 160 191 IPR001943 GO:0005515
Tsu05g01988 339 PANTHER SI:DKEY-261L7.2 88 335 - -
Tsu05g01988 339 Pfam Hemimethylated DNA-binding protein YccV like 210 306 IPR011722 GO:0003677
Tsu05g01988 339 SUPERFAMILY YccV-like 209 305 IPR036623 GO:0003677
Tsu05g01988 339 SMART YccV_like_2_a 207 311 IPR011722 GO:0003677
Tsu05g01988 339 PANTHER SI:DKEY-261L7.2 88 335 - -
Tsu05g01988 339 TIGRFAM yccV: hemimethylated DNA binding domain 208 309 IPR011722 GO:0003677
Tsu05g01988 339 Coils Coil 116 143 - -
Tsu05g01988 339 Coils Coil 179 199 - -
Tsu05g01988 339 Gene3D - 206 309 IPR036623 GO:0003677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01988 05 22971293 22975288 Tsu05g01988 05 22971293 22975288 ECH