Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01643 atGCAAGAATCACTTAATCCAACAAACATGAAGAGGTTCCATATTAAGAATCACAACGACCATGATGAACTTCTGTCTGATTCTCACACTCGTTCTTCCTCAATTTCCAATAGAAAATGTTCTCTTTTCACTTCCACTCGCTTCTTCGCTTCTCTCTTTGTTAtcactctctttctcttctctctttcatTCATTCTTCCATCTTCTCCATCAACAACTACTACTACTGCTACTACTACTCTTAATCTCAAACAATCTCAACGACAAGGTTTGACCAGTGATGCTTCTGATTCTGGTGATTTCATAAAAGATAAACTGCTTGGTGGACTTCTAGCAGCTGGATTTGACGATAAATCCTGTCTCAGCAGGTATCATTCAGTTAAAGGACTATCAGGAAATCCATCTCCTTACCTCATTTCTAGATTACGAAAATATGAAGCTCTCCACAAAAAATGCGGACCATATACTGAATCCTACAATAAGACGGTGAAAGATCTCGGTTCTGGTCATTTAAGTGAGTCCCCAGATTGTAAATACGTAGTTTGGATTTCATTTAGTGGTTTAGGGAACAGGATATTGACCTTAGCTTCTGCATTTCTTTATGCGCTCCTCACAAACCGTGTTCTTTTGGTTGATCCTGGAGTTGATACGGTCGATCTCTTTTGCGAACCGATTCCAGATGTTTCCTGGTTTCTTCCTCCTGATTTCCCTCTAACCAGTCAATTTCATAGTTTCAATCAGAAATCTGATCACTGTCATGGAAAAATGCTGAAAAATAAAGCAGTCACAAATTCAAAAGTGCCTTCTTCTGTCTACCTTCATTTGGTtcatgattatgatgatgaggATAAGCTTTTCTTCTGCGATGAAGAACAAAGGTTTCTGCAGAAAGTACCTTGGTTAATGATGAGAACAGATAATTACTTTATTCCATCACTATTCTTGATGCCGTCTTTTGATCAGGAGCTCGGTAAACTCTTTCCAAACAAGGAAAAGGTTTTCCATTTCTTAGGCAGGTATTTGTTTCACCCTACAAACAAAGTATGGGGATTTGTTACTAGATACTATCAAGCTTATTTAGCTAATGCTGATGAAAGAGTCGGGATCCAGATTAGGGTTTTTGACACGAGAATCGGTCCATTTCAATATGTACTAGATCAAATCTTAGCTTGTACTGTGAAGGAGAATATCTTGCCTAATGTTGACAAGAAGCATGATATTATCAGTTCATTAGGAAATTCGACGTCGAAAGCGGTGCTAATGACATCCTTAAATTCtggttattttgaaaaaataagagaCATGTATTGGGAATATCCAACGGTGACAGGAGAAGTTATCAGTGTTTCACAACCAAGCCATGAGGGACATCAACAAACTGAGAAGCAAATACACAACCAAAAAGCCTGGGCAGAAATGTATCTATTGAGTTTAACCGATGTGTTGGTGACTAGCTCGTGGTCTACTTTTGGCTATGTAGCGCAGGGGCTCGGAGGTCTGAAACCTTGGATACTATACAAACCAGAGAATGAAACAGCACCTGATCCTCCTTGTCGTCGTGTGAAGTCGATGGAGCCGTGTTTTCATGCTCCTCCTTTCTATGATTGTAAGGCTAAAAGAGGAACCGATACAGGTGCACTTGTTCCGCATGTAAGACATTGTGAGGATATGAGTTGGGGTCTTAAGCTTGTAGACAATTAG 1701 0.3815 MQESLNPTNMKRFHIKNHNDHDELLSDSHTRSSSISNRKCSLFTSTRFFASLFVITLFLFSLSFILPSSPSTTTTTATTTLNLKQSQRQGLTSDASDSGDFIKDKLLGGLLAAGFDDKSCLSRYHSVKGLSGNPSPYLISRLRKYEALHKKCGPYTESYNKTVKDLGSGHLSESPDCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGVDTVDLFCEPIPDVSWFLPPDFPLTSQFHSFNQKSDHCHGKMLKNKAVTNSKVPSSVYLHLVHDYDDEDKLFFCDEEQRFLQKVPWLMMRTDNYFIPSLFLMPSFDQELGKLFPNKEKVFHFLGRYLFHPTNKVWGFVTRYYQAYLANADERVGIQIRVFDTRIGPFQYVLDQILACTVKENILPNVDKKHDIISSLGNSTSKAVLMTSLNSGYFEKIRDMYWEYPTVTGEVISVSQPSHEGHQQTEKQIHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENETAPDPPCRRVKSMEPCFHAPPFYDCKAKRGTDTGALVPHVRHCEDMSWGLKLVDN 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01643 566 Gene3D - 175 218 - -
Tsu03g01643 566 PANTHER FUCOSYLTRANSFERASE 2-RELATED 10 566 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tsu03g01643 566 Pfam Xyloglucan fucosyltransferase 89 537 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tsu03g01643 566 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 10 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01643 Tsu-Chr3 16628446 16631854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01643 46 564 Xyloglucan Fucosyltransferase1 AT2G03220 61.524 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01643 K13681 - gmx:100800258 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01643 03 16628446 16631854 Tsu03g01643 03 16628446 16631854 ECH