Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00884 ATGTCTTGGTTAAGAACTCTCTCAAAATTTTCCAACATTAAATCATCTCAAAGACCCAATAAAACAGACCCATTTTTCCTTTCACCATCTTTCACTTTTCTCTCCCATTTCAGCTCTCAACCCATTGAAGAAAAGCCTAGTGTTAAGCATGTTGAGTATGCTTCAAGTTTGGAACCAACAAAGCCTCATGAAAAACCAAGAGTGGTTGTTCTTGGTTCAGGTTGGGCAGGGTGTAGACTAATGAAAGGGTTGGACCCTCATATTTATGACATTGTTTGTGTCTCACCTAGGAATCACATGGTTTTTACTCCTCTTTTGGCTTCTACTTGTGTTGGAACACTTGAGTTTAGATCAGTTGCTGAACCTATTGGAAGGATTCAACCTGCTATTTCTAGGGAACCTGGTTcttatttctttcttgccaattGTACTTCCATTGATGCACACAATCATACGGTGCATTGTGAGACTGTAACTGATGGAGAAAAGACAATAGAACCTTGGAAATTTACAGTCTCTTATGATAAGCTAGTAATTGCATTAGGATCACATCCTGCTACTTTTGGAATTCAAGGAGTCAATGAACACGCCACTTTCCTTCGCGAAGTTCATCATGCACAGGAAATTCGTCGGAAGTTGCTCTTGAACTTGATGCTATCTGATGTTCCAGGAATTtcagaagaggaaaaaaaaaggcttTTGCATTGTGTTGTTGTTGGGGGTGGTCCTACTGGAGTTGAATTCAGTGGTGAACTTAGTGATTTTATCATGAAGGATGTTCGTCAAAGATATACTCATGTGAAGGATTACATTCGTGTTACATTAATCGAGGCAAATGAGATATTGTCGTCTTTTGATGACCGACTCAGGCTCTACGCTACCAAGCAGTTGACTAAGTCAGGAGTTCGTCTTGTTCGTGGCATTGTGAAAGACGTTAAAGCTCAGAAGATTATCCTAAACGATGGTACCGAGGTTCCATATGGTCTATTGGTATGGTCTACTGGTGTTGGTCCATCACCAATTATTCAATCTTTGGATCTGCCTAAAGCTCCAGGTGGAAGGATTGGTGTCGATGAATGGCTTCGTGTTCCTTCGGTACAAGATGTGTTCTCAATAGGTGACTGCAGTGGATTTGTTGAAAGTACTGGAAGACAAACACTTCCAGCATTGGCCCAAGTTGCAGAAAGACAAGGTAAATATTTAGCAAGTATGTTGAATAAAATTGGTACAGCAGGTGCAGGCCATGCAAATAGTGCAAAAGAAATAGAACTTGGTGATCCATTTGTTTACAAGCATCTTGGAAGCATGGCAACTATTGGAAGATACAAGGCTCTTGTTGACCTTAGACAAAGCAAGGAGGGAAAAGGGTTAGCACTGGCAGGAGttctgagtttttttatttggcgCTCGGCGTATATTACACGTGTGGTCAGCTGGAGGAACAGATTCTATGTATTTATCAACTGGATTACAACTCTTATATTCGGCCGTGATATCAGCAGACTATGA 1509 0.3936 MSWLRTLSKFSNIKSSQRPNKTDPFFLSPSFTFLSHFSSQPIEEKPSVKHVEYASSLEPTKPHEKPRVVVLGSGWAGCRLMKGLDPHIYDIVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIGRIQPAISREPGSYFFLANCTSIDAHNHTVHCETVTDGEKTIEPWKFTVSYDKLVIALGSHPATFGIQGVNEHATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKKRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYTHVKDYIRVTLIEANEILSSFDDRLRLYATKQLTKSGVRLVRGIVKDVKAQKIILNDGTEVPYGLLVWSTGVGPSPIIQSLDLPKAPGGRIGVDEWLRVPSVQDVFSIGDCSGFVESTGRQTLPALAQVAERQGKYLASMLNKIGTAGAGHANSAKEIELGDPFVYKHLGSMATIGRYKALVDLRQSKEGKGLALAGVLSFFIWRSAYITRVVSWRNRFYVFINWITTLIFGRDISRL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00884 502 SUPERFAMILY FAD/NAD(P)-binding domain 235 406 IPR036188 -
Tsu03g00884 502 PANTHER NADH DEHYDROGENASE 3 502 IPR045024 GO:0003954|GO:0006116
Tsu03g00884 502 Gene3D - 55 502 - -
Tsu03g00884 502 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
Tsu03g00884 502 PRINTS FAD-dependent pyridine nucleotide reductase signature 68 87 - -
Tsu03g00884 502 PRINTS FAD-dependent pyridine nucleotide reductase signature 235 253 - -
Tsu03g00884 502 Pfam Pyridine nucleotide-disulphide oxidoreductase 67 398 IPR023753 GO:0016491
Tsu03g00884 502 PANTHER NAD(P)H DEHYDROGENASE B2 3 502 - -
Tsu03g00884 502 SUPERFAMILY FAD/NAD(P)-binding domain 65 279 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00884 Tsu-Chr3 8152282 8155987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00884 68 393 EF-hand Containing Proteins AT4G28220 38.872 2.97e-74 241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00884 03 8152282 8155987 Tsu03g00884 03 8152282 8155987 ECH