Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00502 ATGGATGATAATGGTATCACAAATAATGCAGTCAAGAGCAAGTGGATAATGCCTctatcagttttcttcaaagatGCAAGCCTTGTATTCAAGATGGACTCCCTAGCTAAGGAGATACTTGGGATTGCATTCCCATCTGCACTTGCTGTTGCTGCTGATCCAATTGCTTCTCTTATAGACACAGCATTCATAGGCCACTTGGGGCCGGTGGAACTTGCGGCTGCAGGAGTTTCGATTGCTGTGTTCAACCAAGCTTCAAGGATTACTATTTTCCCTCTGGTCAGTATTACAACTTCATTTGTAGCTGAAGAAGATACTATTGATAAAATCAATAGCAGAGCAGCAGAAAAGCAATTCAATGAAAGCATTAAGGCAAAGACCAATGAAGTAATGCCTGATGATCATATGCTTCAAGACATGGAAGCTGGTGCAACCAAACAGGATTGTACCTTGAAAAATGAGACAAAAAATGGAGACGATGCAAATTCAAAGATAAACAAGTCTTCTATTGTTACTAGTAATGGTAACAAGAGTGAGTCAAAACCTATAAGCAAGAAGAGGCACATTGCTTCAGCATCAACGGCATTACTTTTTGGCACAGTCCTTGGCCTTATTCAAGCTGCAACTCTTATATTTGCAGCTAAACCTCTATTAGGTGCAATGGGTTTGAAATATGATTCTCCTATGTTACCACCAGCTGTTAAGTACTTAAGATTGAGAGCCTTGGGTGCTCCTGCAGTGCTTCTCTCCTTGGCCATGCAAGGAATTTTTAGAGGGTTCAAAGACACAACAACTCCTTTATATGTCATTGTTTCCGGGTATACATTGAATGTTGCTATGGATCCACTACTTATATTTTACTTCAAATTGGGCATCAGAGGTGCAGCCATTTCACATGTGCTCTCTCAGTACATTATGGCAACTTTCCTCTTGTTGATATTAATGAGAAAAGTGGATCTCTTACCTCCAAGCATGAAGGATTTGCAGATTTTCAGGTTTCTTAAAAATGgTGGTCTGTTGTTGGCCAGAGTTATAGCAGTGACATTCTGTGTGACCTTATCAGCCTCATTAGCAGCAAGGTTAGGTCCAATTCCAATGGCTGCATTCCAAACCTGCCTCCAGGTTTGGATGACATCATCCCTTCTTGCCGATGGTCTGGCTGTGGCAATACAGGCAATTCTAGCATGTTCATTTGCCGAGAAAGACTATGATAAAGTGACTACTGCTGCAACAAGGACACTGCAAATGAGTTTTGTTTTAGGAGTTGGACTCTCTCTTTTAGTTGGAGGTGGATTGTACTTTGGAGCTGGAGTATTTTCTAAAAACGTTGCTGTTATTCACCTAATCAGACTAGGCCTCCCGTTTGTTGCTGCTACACAACCAATCAATTCATTAGCCTTTGTCTTTGATGGTGTGAACTATGGAGCATCTGATTTTGCTTATTCTGCATACTCCTTGGCAACAAGTGTTACTTCATTATTTATTCTCTACAAGAGTAAGGGTTTTATTGGGATCTGGATTGCTCTAACCATCTATATGAGTCTTCGTATGTTTGCTGGTGTATGGAGGATGGGAACGGGAACAGGACCCTGGCGTTTTCTCAGAGGCCGCTCATTGTCTTGA 1623 0.4091 MDDNGITNNAVKSKWIMPLSVFFKDASLVFKMDSLAKEILGIAFPSALAVAADPIASLIDTAFIGHLGPVELAAAGVSIAVFNQASRITIFPLVSITTSFVAEEDTIDKINSRAAEKQFNESIKAKTNEVMPDDHMLQDMEAGATKQDCTLKNETKNGDDANSKINKSSIVTSNGNKSESKPISKKRHIASASTALLFGTVLGLIQAATLIFAAKPLLGAMGLKYDSPMLPPAVKYLRLRALGAPAVLLSLAMQGIFRGFKDTTTPLYVIVSGYTLNVAMDPLLIFYFKLGIRGAAISHVLSQYIMATFLLLILMRKVDLLPPSMKDLQIFRFLKNGGLLLARVIAVTFCVTLSASLAARLGPIPMAAFQTCLQVWMTSSLLADGLAVAIQAILACSFAEKDYDKVTTAATRTLQMSFVLGVGLSLLVGGGLYFGAGVFSKNVAVIHLIRLGLPFVAATQPINSLAFVFDGVNYGASDFAYSAYSLATSVTSLFILYKSKGFIGIWIALTIYMSLRMFAGVWRMGTGTGPWRFLRGRSLS 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00502 540 MobiDBLite consensus disorder prediction 162 179 - -
Tsu03g00502 540 TIGRFAM matE: MATE efflux family protein 45 506 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu03g00502 540 Pfam MatE 191 282 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu03g00502 540 Pfam MatE 343 493 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu03g00502 540 MobiDBLite consensus disorder prediction 151 185 - -
Tsu03g00502 540 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 12 538 IPR044644 -
Tsu03g00502 540 PANTHER PROTEIN DETOXIFICATION 12 538 - -
Tsu03g00502 540 CDD MATE_DinF_like 37 526 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00502 Tsu-Chr3 4244688 4249892 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00502 03 4244688 4249892 Tsu03g00502 03 4244688 4249892 ECH
Tsu08g01309 08 14870657 14878043 Tsu03g00502 03 4244688 4249892 PCT