Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00289 ATGACTTCTCTTATTGCTCCTTCCAAACACTCCCCAGTTGAAGATGCAGAAGCTCTCCAAAGGGCTGTTAAAGGTTGGGGAGCTGATGAAAAAGCCATTATAGCAATATTAGGTCATAGAAATGCTACTCAGAGGACACAAATCAGACAAGCATACTATGACCTCTATCAAGAGGATCTCATCAAACGCCTTGAATCTGAGCTCTCTGGTGATTTTGAGAGAGCAATGTATAGATGGATATTGGAACCTGCAGAACGTGATGCTTTGTTGGCCAATATAGCACTAAAAAATGCTAACATGAACTATCATGTGATTGTGGAAATTTCATGTGTCTCTTCACCTGATGAGCTTTTTAATGTGAGACGTTCTTATCACAATCGATACAAACGTTGCATGGAGGAAGATGTTGCTACCAATACCACTGGCCATCTTCGCCAGGCAATAATGTGTAGTGATTTAATTTTTGAGCAGCTTTTGGTGGGATTGGTGAGTTCATTTAAGTATGGTGGTAGTGAAGTCAATGCAAGATTGGCACAACATGAGGCTGATATCCTTCATGAGGCTATCAAAAACAAGAATCACAATCATGAAGAAGTAATCAGAATCCTTACAACAAGGAGTAAAACACAACTTGTGGCAACTTTCAATCGTTATAGGGATGATCATGGCATTGCTATCACTAAGAAATTGTTGGATGAAGGATCTGATGACTTTCACAAAGCAGTTCGAATAGCCATTAGTTGCATCAATGATCATAACAAGTACTATGAAAAGGTTCTACGCAACGCGATGGAAACGGTTGGAACTGATGAGGATGCAATCACGCGAGTGATTGTCACTAGAGCTGAGAAGGACTTGGAGGATATAAAAAAGTTGATACAAAGAGTTCagtttgtttctttgtttgttcCACACAATTTATTCATTCAAATCTTAGTTTGTGTGTTTCTAACAAAGATCTCAGTTTGTTTGTTCTCACACTTTCAGTGA 990 0.3838 MTSLIAPSKHSPVEDAEALQRAVKGWGADEKAIIAILGHRNATQRTQIRQAYYDLYQEDLIKRLESELSGDFERAMYRWILEPAERDALLANIALKNANMNYHVIVEISCVSSPDELFNVRRSYHNRYKRCMEEDVATNTTGHLRQAIMCSDLIFEQLLVGLVSSFKYGGSEVNARLAQHEADILHEAIKNKNHNHEEVIRILTTRSKTQLVATFNRYRDDHGIAITKKLLDEGSDDFHKAVRIAISCINDHNKYYEKVLRNAMETVGTDEDAITRVIVTRAEKDLEDIKKLIQRVQFVSLFVPHNLFIQILVCVFLTKISVCLFSHFQ 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00289 329 PANTHER ANNEXIN 6 300 - -
Tsu03g00289 329 Gene3D Annexin 2 81 IPR037104 GO:0005509|GO:0005544
Tsu03g00289 329 Pfam Annexin 258 291 IPR018502 GO:0005509|GO:0005544
Tsu03g00289 329 Pfam Annexin 181 242 IPR018502 GO:0005509|GO:0005544
Tsu03g00289 329 Pfam Annexin 87 149 IPR018502 GO:0005509|GO:0005544
Tsu03g00289 329 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Tsu03g00289 329 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Tsu03g00289 329 PRINTS Annexin family signature 91 112 IPR001464 GO:0005509|GO:0005544
Tsu03g00289 329 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Tsu03g00289 329 PRINTS Annexin family signature 264 284 IPR001464 GO:0005509|GO:0005544
Tsu03g00289 329 PRINTS Annexin family signature 184 210 IPR001464 GO:0005509|GO:0005544
Tsu03g00289 329 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Tsu03g00289 329 Gene3D Annexin 176 250 IPR037104 GO:0005509|GO:0005544
Tsu03g00289 329 Gene3D Annexin 253 299 IPR037104 GO:0005509|GO:0005544
Tsu03g00289 329 SUPERFAMILY Annexin 6 296 IPR037104 GO:0005509|GO:0005544
Tsu03g00289 329 Gene3D Annexin 82 150 IPR037104 GO:0005509|GO:0005544
Tsu03g00289 329 ProSiteProfiles Annexin repeat profile. 176 247 IPR018502 GO:0005509|GO:0005544
Tsu03g00289 329 PANTHER ANNEXIN 6 300 - -
Tsu03g00289 329 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Tsu03g00289 329 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Tsu03g00289 329 SMART annex3 193 246 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00289 Tsu-Chr3 2356163 2366901 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00289 03 2356163 2366901 Tsu08g01334 08 15288472 15290686 PCT