Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00181 ATGTCTAACTCTCATCATAAAATAGTTAAACAACATTCTGAGAATTCATTTTGCTCAGTTTGTTACAACAAGAGACCAAAACTTGATTGGACAAGAAGGGATTTCACATATGCTGAGTTGCATATTGCAACACATGGTTTTTCCGTAACGAATTTTCTCTCTGAAGGTGGATTTGGTTCTGTTTATAAAGGAGAGATTCATGGACAAAAAATTGCTGTTAAAAAATGTATTCATGCAAATCTCAAACAAGAGAAGGAGTTCAAATCTGAAGTTGATACACTAAGCAAAGCAAGACATGAGAATGTTGTTGTGTTGCTTGGATCATGTTCAGAAGGAAAAAATAGGCTTCTTGTTTATGAATTTGTTTGCAATGGTTCACTTGACCAACATTTATCAAGACATTCTCGGAAACCGCTTTGTTGGAAAGATAGAGTGAAAATAGCTAATGGAGCTGCCAAAGGACTTCTATATCTGCATCAGAACAACATCATACATAGAGATATAAAACCAAACAACTTTCTTCTTACACATGATTGTGAAGTTTTGCTAGGTGATTTTGGTTTGGCTAAAATTGCAAGTGAAGAATTCTCATGTTCAATAGAATGTCCTGGAAATTTGGCATATTGGGCACCAGAATATGCAGCATATGGTAAAGTATCAAATAAGACAGATGTGTATTCTTTTGGTGTGGTTCTTGTTGAGCTAATAACAGGAATGAGGACCACAGACAGAAGACTTGGTGGAAAGAGTCTAGTTGGATGGGCTAGGCCACTACTGATAGAAGGGAATTGTCAAAAATTTGTTGATGAAAGGATAATGGATTCCCATGACTGTCACCAAATCCATTGGATGAGTCGTCTAGCTGGAAATTGTTTAAACAAAGATCCCCGTAAACGATTGGATATGAGTACAGTGGTCAAAGCCTTAACACATATAGAGGAAGGTTGCAGTTGCTGCATTCTGGGAAAAGACAGTAGTGCCCTTGCCATGTCAGACTATTCTAAATTAAAAGATGTTATGCAAGACTCTTCAGAATCAGATGGTGAAAGTGGAAATATTGGAAGTAGTTCCATTACTGAAAATTGCAAAAACCTCAAATTATAA 1104 0.3641 MSNSHHKIVKQHSENSFCSVCYNKRPKLDWTRRDFTYAELHIATHGFSVTNFLSEGGFGSVYKGEIHGQKIAVKKCIHANLKQEKEFKSEVDTLSKARHENVVVLLGSCSEGKNRLLVYEFVCNGSLDQHLSRHSRKPLCWKDRVKIANGAAKGLLYLHQNNIIHRDIKPNNFLLTHDCEVLLGDFGLAKIASEEFSCSIECPGNLAYWAPEYAAYGKVSNKTDVYSFGVVLVELITGMRTTDRRLGGKSLVGWARPLLIEGNCQKFVDERIMDSHDCHQIHWMSRLAGNCLNKDPRKRLDMSTVVKALTHIEEGCSCCILGKDSSALAMSDYSKLKDVMQDSSESDGESGNIGSSSITENCKNLKL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00181 367 PIRSF ILK 3 324 - -
Tsu03g00181 367 SUPERFAMILY Protein kinase-like (PK-like) 30 311 IPR011009 -
Tsu03g00181 367 Gene3D Transferase(Phosphotransferase) domain 1 122 320 - -
Tsu03g00181 367 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 341 - -
Tsu03g00181 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Tsu03g00181 367 Gene3D Phosphorylase Kinase; domain 1 27 121 - -
Tsu03g00181 367 PANTHER OS01G0253100 PROTEIN 3 341 IPR045271 GO:0004714|GO:0006468
Tsu03g00181 367 SMART serkin_6 47 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00181 367 Pfam Protein tyrosine and serine/threonine kinase 50 309 IPR001245 GO:0004672|GO:0006468
Tsu03g00181 367 ProSiteProfiles Protein kinase domain profile. 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00181 Tsu-Chr3 1470173 1472040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00181 35 316 Trihelix Transcription Factor Family AT5G38560 44.068 1.97e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Tsu03g00181 PK_Tyr_Ser-Thr 7.3e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00181 03 1470173 1472040 Tsu08g01496 08 17309137 17314549 PCT