Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00153 ATGGACCCTAAAGTTGATAATGGTGCCATCACATACCCTTCAAAGGGAGAAGCCTCAAACAatacaaaacaagaaaaaggaaaggaatTAGAAATTGGTGAGGAAAAAGAGTTAACTATTGAGCAACTAGAAGAGCTAATATggaaatatgaaatgaatttaaGGAGGTTGAAAGATGAAAGAAGACTAAGAGAGTATGGTTCTTCATTGGAACacttgaaaagaaagaaattgtcTGATGCACAAGATGGTGTACTAAGGTACATGTTAACAATGATGGACGACTGTGATGTCCGTGGTTTCGTCTATGGAATTGTACCTCAACATGGAAAACCGGTGAGTGGCTCATCGGATAATTTAAGAGGCTGGTGGAAGGACAAAGTCAAATTTGACAGAAATGGTCCAGCTGCAATTTTAAAGTGTGAGAACGAAAATGGAGTTTTAAGAATGGATGGTATATTGAATAGTGAACCAGCAACGCCTCACTTGTTGCATAAACTAACCGATCCAACATTAGCTTCCCTCGTATCATCGTTAATTCAACAATGTAATCCACCGCAAAGGAATTACCCATTGGGAAAAGGTGTTCAACCACCATGGTGGCCAACGGGGAAAGAATCGTGGTGGAAAGAACTGAAATTTAGTGAAGATCCTGGCCCACCACCCTACAAGAAACCACACGATCTAAAAAAGGCATGGAAAGTCTCTGTGCTTACTGCTATTATTAAACACCTTTGTCTTGATGTCAATAAGATGAAGCATGCTGTTAGAAACTCGAGACCTTTGCAAGATAGGCTCACCGCCAAGGAAACAGCTATCTGGGTTGCGGTTATTAATAACGAGGCAAGAATTGCTAGTGAAATGTATCCCGGTTCCTTCACGAATTATAATACTTGTACTGGTGGAAGTAATGATTTGTTTGTGGAAACAAATGATTATGATGTGGAATCTGAGTCTCCTAATAGCAAAAGGGTTGAGAAAACTTGTCTTCTTGATCATGGAGGTGCTAATAGAAAAAGGGTTGAGAAAACTAGTCTTCCTCATGATGCTTTTAAACCTATTGATCCTCATTTTCAATATCATGATCATGGAAGTGCTTTTGTTGGAAGTGACTTAGCTGGAAGTTGGGGAGGTCAGAACCAAATTCAACTAAATTTCGATTCTGTTGATCGGTATCCGATGAACAATCTTGTTGAAAGCGGCGGTAATAAGAGAAAGGCTGGAGAACTTGTTGAAAACACTACTTGTATTAATCCTCAATTCCAATATCATAATCAAGGAAGTGGTGTTAACAATTCATCACAGATAAACTTTTCTGTTATGCCACCTGAGGTTGCTAACAAGAGAACATGTGAACTTGGTATGAGTTTTATGCATCAATATGAAAATTACTCTTTGCAAGAAGACATGAATGTTAGAAACAATCACCACTCTGCAAGCACACAAATAGGAAGTAGCAGTAGCAGCATCAACAACAATTACAATCAATTCCAAATGGTTGATGTTGGAGGGTCAAGAACTCATCAAGATGTTGCACCTCTTGATCAACATGTGCATGCTGCAATACCTTCTGTTCCAAATCAGATCACTCATCATACAGATAATTACTCAGGAGCAAGAGAAGAAGTTATGAACACAAATCCAACTCCTGTTGTTAACCAAAATATGCAGCCAGACACTTTTTTGGTCAACTGTAATTACTCAGGAGGAAGCTCAGAAGAAGTTATGAACACAATTCCAACTTCTGTTGTTAACCAAAATATGCAGCCTCAATTGGAGAACAATTTCTATGGTGAACAAGAGGTTGCAAATATGCAGCCTAGTGTTGTAGCAGATGCAAAtgtgtcaacaacaacaaactttgatttttcatttgatGATTTGGAAGCATTCCATTCTCAATTTGATGGTGAAGCTAACAACAAAATTCCATTTATTGATTCTCCTACTGTGGAAACACCAAGTTATGATTTACCAACTTGGTTCTACAATATCTAG 1998 0.3684 MDPKVDNGAITYPSKGEASNNTKQEKGKELEIGEEKELTIEQLEELIWKYEMNLRRLKDERRLREYGSSLEHLKRKKLSDAQDGVLRYMLTMMDDCDVRGFVYGIVPQHGKPVSGSSDNLRGWWKDKVKFDRNGPAAILKCENENGVLRMDGILNSEPATPHLLHKLTDPTLASLVSSLIQQCNPPQRNYPLGKGVQPPWWPTGKESWWKELKFSEDPGPPPYKKPHDLKKAWKVSVLTAIIKHLCLDVNKMKHAVRNSRPLQDRLTAKETAIWVAVINNEARIASEMYPGSFTNYNTCTGGSNDLFVETNDYDVESESPNSKRVEKTCLLDHGGANRKRVEKTSLPHDAFKPIDPHFQYHDHGSAFVGSDLAGSWGGQNQIQLNFDSVDRYPMNNLVESGGNKRKAGELVENTTCINPQFQYHNQGSGVNNSSQINFSVMPPEVANKRTCELGMSFMHQYENYSLQEDMNVRNNHHSASTQIGSSSSSINNNYNQFQMVDVGGSRTHQDVAPLDQHVHAAIPSVPNQITHHTDNYSGAREEVMNTNPTPVVNQNMQPDTFLVNCNYSGGSSEEVMNTIPTSVVNQNMQPQLENNFYGEQEVANMQPSVVADANVSTTTNFDFSFDDLEAFHSQFDGEANNKIPFIDSPTVETPSYDLPTWFYNI 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00153 665 MobiDBLite consensus disorder prediction 1 30 - -
Tsu03g00153 665 Pfam Ethylene insensitive 3 42 281 IPR006957 GO:0005634
Tsu03g00153 665 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 23 583 - -
Tsu03g00153 665 SUPERFAMILY DNA-binding domain of EIN3-like 161 284 IPR023278 GO:0003700|GO:0005634
Tsu03g00153 665 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 23 583 IPR006957 GO:0005634
Tsu03g00153 665 Coils Coil 40 60 - -
Tsu03g00153 665 Gene3D - 67 140 IPR023278 GO:0003700|GO:0005634
Tsu03g00153 665 Gene3D - 159 292 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00153 Tsu-Chr3 1276155 1279975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00153 37 316 EIL Transcription Factor Family AT3G20770 52.448 1.79e-101 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Tsu03g00153 EIN3 3.1e-94 No_clan