Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05621 atgatggtgatggaGTTAAGATTCCGAACATTATTGTTAGTTGTGAGTTTCATAACaactttttctattttcactttCCTCATTCTTCACcataacaacaacaactcaATCTCTCTTTTGAGGGGATTTTCCAACATCAATCTATTATTGCCCCCACCGCCTTCCACTTCTACTTCTGCCCCTGCCCCcccaaacaataataataaacaacaacaacaacaacagcttCACAATATTACAACACttgaatatgatgatgatgatgaagaagaaggagaaaaaggAAATCACAGCATTATTGTTACAGAGGACCTCTTtcaacaaccaccaccacctcaCACACAAACAATCCCAGATGATCCAAAATTACTTGATGGACTTTTAGTTTCAACGTTTCACAAACCATCCTCCTGCTTAAGTAGATATCAATCTCACTTATACCGCAAACCTTCCCCTTATAAACCTTCTGCATATCTCATATCCAAGCTACGAAACTATGAACGTCTTCATACAACTTGTGGACCTCATACCAAATCATACgccaaaatcatcatcaccaccacaAAAAACCCTACACATTGCAAATACCTTGTTTGGACACCTTCCAATGGATTGGGGAACAGGATAATAACCTTGGCTGCCACATTTCTTTATGCTATCCTCACTGACCGGGTACTACTTGTCAAATTTGGGATTGACATGTTTGGTCTCTTTTGTGAACCGTTTCCTCATTCCTCCTGGTTATTGCCCAGGAACTTTCCATATTGGAAAAATCACAAACATATTCAAACCTATGAAACCATGTTAATGAGTAGCAAGAAAAACGGAGCAAAGGTGCTTTTGCcacaatttctttttcttaatctacAGCACTCCCATGATGGTCATAACAACTTCTTTCATTGTGATCAAAGTCAAGCTCTTCTCCAGAAAGTTCCGGTTCTAATTTTGTCGTCGGATCAATACTTTGTCCCTTCTCTTTTTATGATTCCATCCTTTCAACAAGAATTAAGCAAAATGTTCCCCGAGAAAGACACTGTTTTTCACCATTTGGGACGTTACCTTTTTCAACCATCCAATGAGGCATGGGAACTAATTAGAAGCTTCTATGAGGCGCACTTAGCCAATGCTAATGAGAAAATTGGCTTGCAGATTAGAGTATATAACACTCACCGGGCACCACATACAACTATTATCAATGAAATTCTAGCCTGCACCCTTCAACATAAGCTGTTGCCCGAATTGGACTCACAGAAGGCAGCAACATCTCGTTTGAAGAAGCATACATCAAAAGCTGTTCTAGTGGCATCTCTATATTCTGAATATGGTGAGAAGCTGAGGACTATGTATAAGGCAAATACAACTGTGACTGGTGAGGTAATCAAAGTTTATCAGCCAAGTCACGAAGGGCgtcaaaaatcaaataatgACGCACACAATATTAAAGCATGGACAGAAATATATCTACTGAGTTTGTGTGATGCATTGATTACAAGCCCCAAGTCTACTTTTGGGTATGTTGCCCATAGTCTTGGAGGTTTAAAGCCATGGATTCTAAAGAGGGCATATGGGGAAACCATCCCAAATCCACCTTGTCAACGAGCAATGTCCATGGAGCCTTGTTTCCATTAA 1632 0.3511 MMVMELRFRTLLLVVSFITTFSIFTFLILHHNNNNSISLLRGFSNINLLLPPPPSTSTSAPAPPNNNNKQQQQQQLHNITTLEYDDDDEEEGEKGNHSIIVTEDLFQQPPPPHTQTIPDDPKLLDGLLVSTFHKPSSCLSRYQSHLYRKPSPYKPSAYLISKLRNYERLHTTCGPHTKSYAKIIITTTKNPTHCKYLVWTPSNGLGNRIITLAATFLYAILTDRVLLVKFGIDMFGLFCEPFPHSSWLLPRNFPYWKNHKHIQTYETMLMSSKKNGAKVLLPQFLFLNLQHSHDGHNNFFHCDQSQALLQKVPVLILSSDQYFVPSLFMIPSFQQELSKMFPEKDTVFHHLGRYLFQPSNEAWELIRSFYEAHLANANEKIGLQIRVYNTHRAPHTTIINEILACTLQHKLLPELDSQKAATSRLKKHTSKAVLVASLYSEYGEKLRTMYKANTTVTGEVIKVYQPSHEGRQKSNNDAHNIKAWTEIYLLSLCDALITSPKSTFGYVAHSLGGLKPWILKRAYGETIPNPPCQRAMSMEPCFH 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05621 543 MobiDBLite consensus disorder prediction 51 75 - -
Tsu02g05621 543 Gene3D - 363 518 - -
Tsu02g05621 543 MobiDBLite consensus disorder prediction 61 75 - -
Tsu02g05621 543 Gene3D - 192 242 - -
Tsu02g05621 543 PANTHER FUCOSYLTRANSFERASE 2-RELATED 7 543 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tsu02g05621 543 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 7 543 - -
Tsu02g05621 543 Pfam Xyloglucan fucosyltransferase 119 543 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05621 Tsu-Chr2 64363702 64365506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05621 112 543 Xyloglucan Fucosyltransferase1 AT2G03220 51.701 9.83e-152 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05621 K13681 - gmx:100799776 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05621 02 64363702 64365506 Tsu06g00071 06 554445 557561 PCT