Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05275 ATGGCTGAAATCGAAGAAATTGGACCTGATGTTTGCTCAGATTTAGATGTCGACGATATTAGAGATCAAAATATACCAGAGAAAGATGTTAGCGATGAAGATATTGAACCGGAAGATTTGGAGAGGCGGATGTGGAAGGATCGTATCAAACTCAAAAGGCTCAAGGAAAAACAAAAGCTTGAAGCACGGCAAGCTGCAGAGAAGCAAAAGCCAAGGCAGTCATCTGATCAAGCTCGTAGGAAGAAAATGTCGAGGGCACAAGATGGGATTCTTAAGTATATGCTGAAGCTTATGGAAGTCTGCAAAGCTCGTGGGTTTGTGTATGGAATCATTCCTGAGAAAGGGAAACCCGTTAGTGGTTCCTCTGATAACATTAGAGCTTGGTGGAAAGAAAAGGTCAAATTCGATAGGAATGGTCCTGCGGCCATAGCTAAGTATGAAGCAGAGTGTCTTGCTATGATTGAGGCTGACAATAACCGAAATGGGAACTCTCAGAGCATGCTCCAAGACCTGCAAGATGCAACTCTCGGGTCGCTCTTGTCTTCTTTGATGCAACATTGTGACCCTCCTCAGAGAAAATATCCATTGGAAAAGGGAGTTCCCCCGCCTTGGTGGCCTACTGGAAATGAAGATTGGTGGTTGCATTTGAATTTACCTCACGGTCAGGGTCCTCCTTATAAGAAACCTCACGATTTGAAGAAGATGTGGAAAGTGGGAGTGCTAACTGCTGTGATAAAACACATGTCACCTGATATCGCAAAAATAAGGAGGCACGTCCGCCAATCAAAATGCTTGCAAGACAAGATGACGGCTAAGGAAAGTTCAATTTGGTTGGGGGTATTAAGTCGAGAAGAAGCTCTCATTAGGCAGCCTAGTAGTGATAATGGTACGTCTGGAATAACCGAAATGCCAGTCGGCATTCCTATTGAGAATAAGCAACCTGCTACTAGTAGTGCAAGCAACTATGATGTTGAGAACTATGATGTTGATGTTACTGACGATGGTATTGGTTCTGTTTCTTCCAAAGAAGACAGGAGCAATCAGTTTATGGATGCCGAGCCATCAGATAACTTGCGCAGGAGTTCTATCAAAGACACAGATCGAGCTCAAAAACCTCGAAAGAAACGACCACGTCCTAGGTCAAAAGCAGCCAACAAATTACCAGCACAATCTGacaatgaaattttaaatgttGAACCTATAAGCAAAGTGCCCAACATCAATGGAAGAGAAGAAGCACATGTAGTTGGACTCCTCCAGATTCATGGAAATGGACAGGTCAATGGGACCGATTCTGTTTTGAGACTGCCTGAAAGAGTACACGAGGTGCCAGTTCAACTAGCAGCACCCGAGTTCGACCATTACTCTTATATGCATGCAAACAATGTAATTTCCCCGGAAAGCATGTATATGAGTGGAAGGCCATTGCACTATCCTCACTTGCAAAACCCTCCTGACATGCCTCATGAAGATACTTATATTTTCAATACAGTCGGAGGAGGATATGGTCCTAGTCAAGATGGGCCGCATCAGCATCTGCAGCCCGATCCTGCTGCTAACATTGAACCAGGATATGGTCCTAGTCAGGATGGGCCACATCAGCATCTGCAGCCCGGTCCCGCCGCGAACATTGAACCAGGATATGGTCCTAGTCAGGATGGGCCGCTTCAGCCTCTGCATCCCAGTCCTGTTGCAAACATTGAACCAATTAGGCAACCAGAGAATGCTGCAATCACTATGCCTCCAGCACATATGAGAGGTGATGAAATTAGCGGAGGAGACATGAATTATTTTGCTAAAGATGCATTCCAAAACGAGCTTGATAGGCCTATAGAACCTTTCTTTGGATCACCAATCAGTAACATGCCATTTGATTTTGGAGGCCTTAACAGTCCACCTTTCCATTTAGATGATTTCTTGGGCGATGATGAAATGATTCAGTACTTTGGAGCATAG 1956 0.4438 MAEIEEIGPDVCSDLDVDDIRDQNIPEKDVSDEDIEPEDLERRMWKDRIKLKRLKEKQKLEARQAAEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDRNGPAAIAKYEAECLAMIEADNNRNGNSQSMLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWLHLNLPHGQGPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESSIWLGVLSREEALIRQPSSDNGTSGITEMPVGIPIENKQPATSSASNYDVENYDVDVTDDGIGSVSSKEDRSNQFMDAEPSDNLRRSSIKDTDRAQKPRKKRPRPRSKAANKLPAQSDNEILNVEPISKVPNINGREEAHVVGLLQIHGNGQVNGTDSVLRLPERVHEVPVQLAAPEFDHYSYMHANNVISPESMYMSGRPLHYPHLQNPPDMPHEDTYIFNTVGGGYGPSQDGPHQHLQPDPAANIEPGYGPSQDGPHQHLQPGPAANIEPGYGPSQDGPLQPLHPSPVANIEPIRQPENAAITMPPAHMRGDEISGGDMNYFAKDAFQNELDRPIEPFFGSPISNMPFDFGGLNSPPFHLDDFLGDDEMIQYFGA 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05275 651 SUPERFAMILY DNA-binding domain of EIN3-like 166 289 IPR023278 GO:0003700|GO:0005634
Tsu02g05275 651 MobiDBLite consensus disorder prediction 1 38 - -
Tsu02g05275 651 Pfam Ethylene insensitive 3 38 285 IPR006957 GO:0005634
Tsu02g05275 651 Coils Coil 48 68 - -
Tsu02g05275 651 MobiDBLite consensus disorder prediction 14 30 - -
Tsu02g05275 651 Gene3D - 72 148 IPR023278 GO:0003700|GO:0005634
Tsu02g05275 651 Gene3D - 158 296 IPR023278 GO:0003700|GO:0005634
Tsu02g05275 651 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 649 IPR006957 GO:0005634
Tsu02g05275 651 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 1 649 - -
Tsu02g05275 651 MobiDBLite consensus disorder prediction 357 372 - -
Tsu02g05275 651 MobiDBLite consensus disorder prediction 498 565 - -
Tsu02g05275 651 MobiDBLite consensus disorder prediction 60 83 - -
Tsu02g05275 651 MobiDBLite consensus disorder prediction 341 355 - -
Tsu02g05275 651 MobiDBLite consensus disorder prediction 333 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05275 Tsu-Chr2 61560785 61564607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05275 18 371 EIL Transcription Factor Family AT1G73730 69.859 3.73e-173 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Tsu02g05275 EIN3 8.1e-127 No_clan