Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04118 ATGGAAGCATTATGTGCAATATCATCATGCATAATTCTTTTAGTAACGCTTGTTTGGGCATGGAAAATGTTGATATGGTCATGGCTAACACCCAAGAAGCTAGAAAAGTTGTTAACAGAACAAGGCTTTAAAGGGAACCCATATAAGCTTTTAGTTGGAGACATGAAGGAGTTTATGAAGATTCAAAAGGAAGCAAGATCCAAACCCATGCCTCTATCTGATGATATAGTCTCTCGTGTGTTTCCCTTCGGTTACCAAACCGTTGCTAAACATGGAAAGAATTCTTTTATCTGGTTTGGACCAACACCAAGGGTGATCCTAACAGATCCTGAATTAATTAAAGAAGTTTTCAATAGGATCTATGACTTCCAAAAGCCTAATACAAATCCTCTTGTCAGAATACTAGCTACTGGTCTTATAATCCATGAGGGAGAAAAGTGGAATAAGCATAGAAAGATAATTAATCCTGCATTccatttagaaaaattgaagATGATGTTACCATTATTCTTTAAAAGTTGCAATGATCTCATTAGCAAATGGGAGGAaatgttatcatcaaatggatcaTGTGAAATTGATGTATGGCCATCCATTCAAAATTTGTCCAGTGATGTTATTGCTCGAACAGCTTTTGGAAGTAGTTATGAGGAAGGAGTAAGAATATTTCAACTTCAAAAGGAACAAGCTGAACTTACTATGGAAGTTTTGATGAAAATTTACATCCCTGGTTGGAGGTTTCTACCAACTACTACAAACAAAAGGTTGAAAGAAATTGACAGAGATATTATAGCTTCCTTGACTAATATGATTaataagagagaaagagaaataaaggAAGGTGAAGCCACTAAGAATGACTTATTAGGCATTCTTTTGGAATCAAATCacaaggaaattgaagaaaacaacaacaataaaaatgtTGGAATGAATCTTGATGATGTAATCAAGGAATGCAAGCTTTTCTATCTTGCAGGGGAAGAAACAACTTCAGTTTTGCTTGTTTGGACAATTGTATTACTAAGTAAAAACCCTAATTGGCAAGCACGTGCAAGGGAGGAAGTTCTACAAGTTTTTGGAAACAAAGAACCAGATTTTGAAGGTCTAAGTCATCTTAAGATTGTGACCATGATTTTGTATGAGGTTTTAAGGTTATATCCACCAGTAGTTGTAATTCCTCGAGCTGTTTACAAAGATGTAAAAGTTGGAAACTTAACATTACCAGCTGGAGTACAAATTGCCTTACCAATAGTTTGGCTTCATCATAACTCTGAACTATGGGGTGATGATTCCAAGGTGTTCAATCCTGAGAGATTTTCTGAAGGAATTTCCAAAGCATCAAATggtagaatttcattttttccatttggTTGGGGTCCTAGAAGTTGCATTGGACAAAACTTTTCCATGTTGGAAGCAAAGATGGCAATAGCATTGATTTTGCAACATTTCTCATTTGAACTTTCTCCAACTTATGCTCATGCTCCAACTCCAGTAATTACTCTTCAGCCACAATATGGTGCTCATATCACTCTACATAAagtttaa 1551 0.3314 MEALCAISSCIILLVTLVWAWKMLIWSWLTPKKLEKLLTEQGFKGNPYKLLVGDMKEFMKIQKEARSKPMPLSDDIVSRVFPFGYQTVAKHGKNSFIWFGPTPRVILTDPELIKEVFNRIYDFQKPNTNPLVRILATGLIIHEGEKWNKHRKIINPAFHLEKLKMMLPLFFKSCNDLISKWEEMLSSNGSCEIDVWPSIQNLSSDVIARTAFGSSYEEGVRIFQLQKEQAELTMEVLMKIYIPGWRFLPTTTNKRLKEIDRDIIASLTNMINKREREIKEGEATKNDLLGILLESNHKEIEENNNNKNVGMNLDDVIKECKLFYLAGEETTSVLLVWTIVLLSKNPNWQARAREEVLQVFGNKEPDFEGLSHLKIVTMILYEVLRLYPPVVVIPRAVYKDVKVGNLTLPAGVQIALPIVWLHHNSELWGDDSKVFNPERFSEGISKASNGRISFFPFGWGPRSCIGQNFSMLEAKMAIALILQHFSFELSPTYAHAPTPVITLQPQYGAHITLHKV 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04118 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Tsu02g04118 516 Coils Coil 264 284 - -
Tsu02g04118 516 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04118 516 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04118 516 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04118 516 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04118 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 512 - -
Tsu02g04118 516 Gene3D Cytochrome P450 28 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04118 516 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04118 516 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04118 516 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04118 516 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04118 516 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04118 516 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04118 516 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04118 516 SUPERFAMILY Cytochrome P450 79 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04118 516 Pfam Cytochrome P450 90 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04118 516 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 11 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04118 Tsu-Chr2 48097839 48103153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04118 3 516 Cytochrome P450 AT3G14690 55.340 0.0 629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04118 02 48097839 48103153 Tsu02g04118 02 48097839 48103153 ECH