Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04117 ATGGCTACTACAACAATAATTCTCTTCACCTTGATGATACTTGTTCTTACATGGGCTTGGAGGATTTTAAATTGGTTATGGTTTAAGCCAAAGAAGCTAGAAAAATTACTAAGAGAACAAGGACTTAAAGGAAATTCATATAGACTTTTAGTTGGAGATGTAAAGGATCTTCTAAAGATGAGAAAGGAAGCAACATCTAAACCTATGAATCTTTCTGATGATATTGTTCCTCGTGTGTATACCTATCTCCAACAAAGTGCTATAAAATATGGAAAGAATTCTTTTATGTGGTTTGGACCAACACCAAGGGTGAATATCGCAGATCCTGAGCTAATTAAAGATGTACTTACCAAAAACTACGACTTCCAAAAGCCTCATACGAATCCGCTTGTCAAGTTACTAGCTTATGGTCTTGTAAGTCTCGAGGGAGAACAATGGAGCAAGCACAGAAAGATAATCAATCCGGCATTccatttagaaaaattgaagATCATGTTACCGATATTCTTCAAAAGTTGTGATGATCTGATTAGGAAATGGGACAAAATGTTGTCATCGGATGGAACATGTGAAATGGATGTATGGCCTTTCCTTCAAAACTTGGCGAGTGATGTTATTTCTCGAACAGCTTTTGGAAGTAGTTatgaagaaggaaaaagaaTATTTCAACTTCAAATCGAACAAGCTGAACTCACAAAAAAAGTTATTGCAAAAGTTTACATCCCTGGATGGAGgttTGTACCAACTACTACTCATAGGAGGATGAGAGAAATTGCTAGAGATATTAAAGCTTCCCTTACCGATATGATTAACAAACGAGAGATTGCACTAAAGGCAGGTGAATCAACTAAGGATGATTTATTAGGCATACTTTTGGAGTCAAATCACAAGGAAAAGGAAGAACATGGCAACAATAAGAATGTCGGAATGAGTCTTGAAGATGTAATAGAGGAATGCAAACTATTCTACTTTGCAGGGCAAGAAACAACTTCAGTTTTGCTTGTTTGGACAATGGTGTTGTTGAGTAGGTATCCCAATTGGCAAGCGCGTGCAAGGGAGGAAGTATTACAAGTCTTCGGCAACAAAAAGCCAGATTTTGATGGACTAAGTCATCTTAAGATTGTGACAATGATTCTTTATGAGGTTCTTAGATTATATCCACCAGTAATCATGCTTGGTCGAAGTGTTCATGAAGATGTAAAATTGGGAAACCTAACATTACCGGCTGGAGTGGATCTCTCCTTACCGATAGTTATGGTTCACCATGATGTAGAACTATGGGGTGATGATGCTAAGGTGTTCAATCCCGAAAGATTTTCTGAAGGTGTTTTAAAAGCAACAAATGGAAGAAATTCATTCTTTCCATTCGGATGGGGTCCTAGAATTTGCATTGGACAAAACTTTTCCATGTTGGAATCAAAGATGGCAATAGCATTGATTTTGCAACATTTCTCATTTGAACTTTCTCCAAGTTATGCTCATGCTCCAAATGCGCCTGAACCTTCCACCACAACTACTTCAAAACTAGCTGTCGAAGTGGTTGATGACCCAACGAATGACAATCCTGGTGATAAACCTAACTCAACCCACGTTATATCTCCTACTCCTGACAAACCCCAAAACACAAATTTGGGCCAGGATGAAACCTCACCAGCTGTTTTGGTTCCAGAAATCTCTCCTGACTCTATTGTGAAAAACATTGTCAGTGAGCTGAACCAACAATTAGAGCATTCAGGGGAAGAAGAAATTTCTCCAACCGTCAAAGCTGTCGAAGACACAGGGGTTTCAACCCAAGTTATTGTGTCAACTCCTGATGAAACTTCCCCTCCCAAGGCATCTGTTGAAGTCGATCCAAATGCTGAAGCTGACTCTTTAAATGTTAAGGAAGTTAAAAACTCTGAGGCACCAACTCAAGAGGTTTCGTCAACCACTCAAGAGCAATCTTCGCCTAAGAAATCTGCTGAGGTTGTGGGCGCCTCTTCGAATGCCAAAGAAACTGAACCCAGTGGAGAAAAAGGAAAGGTAACGGCGAATGTTGACCCTCAAGCTTCAAAGGATGAAAATCCAACTGGTGATGTAGCTCAAACTCAAGTGGATCCTCCCATCGAAGGCAACATTGCTACTCAAGCCAATCCTGATCCTTCTTTAATCGAAGAACCAATACTCAATTCCCCTCAACCTTTGGATAACAATGACAATGTTGTTACTAAGGCTGTAGGGGATGATGGAGACAATTCATCGAATAAGGGTGAGCACTCCTCAACTAGGGACCATCATCAATCTAAGTCAAGAGACGAAGACGAGGCATATGAGGCCACTGATGATTTTCTGAACTCTAGCGCGGGATATGCACGCACTGCCAGGACTGGAGATTCACTTGAGGACGATGGTACTTCCGCCTCGAAGCCTGTTTCAGACTTTTATCTTCCATCCCATATTTTGCAATGTGTCAAGAGTTTAGCTCCTGAAGATGCTTTGGATACACTTCTTAAGACCTATGGTAACGAGGTTCCCATTGCAGAAGATCAAAAGCAAGAGCTCGAGCAAGAACGAGAATCATTGGAGCTCCATTTTCAGAAAGCCATTGTCGAAGGAAATATGCTGAGCCATATTGACAGGGATCCCActtcatatttcaatttcaagtcTTTCTTTCATAAACTCCAAAACCACTCCATTTCTGAAGCCCTTTCCTTCCAAGTCACCCAAGTTAAAAATTTCCTGGACCAATATGCTAGAAGTCTCCAACATTTTAACAGGATCTCCAATGACTTGAATAACCAGATCAATACTCGTACCAAATATTTCGATCTGGCCTCACAAGGGAACACAGAGGTTAACACATTGAAGGTTGCATCCACTAGTGCTTTTCTACAGGTGTCAGCTTGTGAGGACAATATAGCTCAATGGAAGTTGGAAATTAGAGAGTTAGAAGAGAAAATCGCCCAagaggaagagaagaaaaagcaaCTCGAAGAGAAGGCTATCGAAGTTCCAAGGGCTGTTAtcgaagagaaagaaagaataggcATCCAGCATTACAGTGAAGCTATTAGAGCTGGTGTCGAAGTGGATCGTCTCGCAGGGGAGAAAAATGTTGTGCAAAGGAAGTTAGCCCATATCAAGGACCTTTATGGTCAGTTTCGATAG 3150 0.3949 MATTTIILFTLMILVLTWAWRILNWLWFKPKKLEKLLREQGLKGNSYRLLVGDVKDLLKMRKEATSKPMNLSDDIVPRVYTYLQQSAIKYGKNSFMWFGPTPRVNIADPELIKDVLTKNYDFQKPHTNPLVKLLAYGLVSLEGEQWSKHRKIINPAFHLEKLKIMLPIFFKSCDDLIRKWDKMLSSDGTCEMDVWPFLQNLASDVISRTAFGSSYEEGKRIFQLQIEQAELTKKVIAKVYIPGWRFVPTTTHRRMREIARDIKASLTDMINKREIALKAGESTKDDLLGILLESNHKEKEEHGNNKNVGMSLEDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPNWQARAREEVLQVFGNKKPDFDGLSHLKIVTMILYEVLRLYPPVIMLGRSVHEDVKLGNLTLPAGVDLSLPIVMVHHDVELWGDDAKVFNPERFSEGVLKATNGRNSFFPFGWGPRICIGQNFSMLESKMAIALILQHFSFELSPSYAHAPNAPEPSTTTTSKLAVEVVDDPTNDNPGDKPNSTHVISPTPDKPQNTNLGQDETSPAVLVPEISPDSIVKNIVSELNQQLEHSGEEEISPTVKAVEDTGVSTQVIVSTPDETSPPKASVEVDPNAEADSLNVKEVKNSEAPTQEVSSTTQEQSSPKKSAEVVGASSNAKETEPSGEKGKVTANVDPQASKDENPTGDVAQTQVDPPIEGNIATQANPDPSLIEEPILNSPQPLDNNDNVVTKAVGDDGDNSSNKGEHSSTRDHHQSKSRDEDEAYEATDDFLNSSAGYARTARTGDSLEDDGTSASKPVSDFYLPSHILQCVKSLAPEDALDTLLKTYGNEVPIAEDQKQELEQERESLELHFQKAIVEGNMLSHIDRDPTSYFNFKSFFHKLQNHSISEALSFQVTQVKNFLDQYARSLQHFNRISNDLNNQINTRTKYFDLASQGNTEVNTLKVASTSAFLQVSACEDNIAQWKLEIRELEEKIAQEEEKKKQLEEKAIEVPRAVIEEKERIGIQHYSEAIRAGVEVDRLAGEKNVVQRKLAHIKDLYGQFR 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04117 1049 Gene3D Cytochrome P450 26 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04117 1049 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04117 1049 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04117 1049 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04117 1049 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04117 1049 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04117 1049 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04117 1049 PANTHER CYTOCHROME 10 497 - -
Tsu02g04117 1049 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04117 1049 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04117 1049 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04117 1049 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04117 1049 Coils Coil 830 864 - -
Tsu02g04117 1049 MobiDBLite consensus disorder prediction 514 548 - -
Tsu02g04117 1049 SUPERFAMILY Cytochrome P450 77 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04117 1049 Pfam Cytochrome P450 80 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04117 1049 MobiDBLite consensus disorder prediction 630 666 - -
Tsu02g04117 1049 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 497 - -
Tsu02g04117 1049 MobiDBLite consensus disorder prediction 681 712 - -
Tsu02g04117 1049 MobiDBLite consensus disorder prediction 521 548 - -
Tsu02g04117 1049 MobiDBLite consensus disorder prediction 600 770 - -
Tsu02g04117 1049 Coils Coil 960 997 - -
Tsu02g04117 1049 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Tsu02g04117 1049 MobiDBLite consensus disorder prediction 744 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04117 Tsu-Chr2 48072297 48085083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04117 1 496 Cytochrome P450 AT3G14690 58.551 0.0 628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04117 02 48072297 48085083 Tsu02g04117 02 48072297 48085083 ECH