Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04116 ATGGCTACAAGTACAGCAATAATTTTCTTCACCTTGATGATACTTGTTCTGACATGGGCATGGAGAATTTTGAATTGGTTATGGTTTAAGCCAAAGAAGCTAGAAAAATTACTAAGAGAACAAGGACTTAAAGGGAATTCATATAGACTTTTAGTTGGAGATGTAAAGGATCTTCTAAAGATGAGAAAGGAAGCAACATCTAAACCTATGAATCTTTCTGATGATATTGTTCCTCGTGTGTATACCTATCTCCAACAAAGTGCTATAAAATATGGAAAGAATTCTTTTATATGGTTTGGACCAACACCAAGGTTGAATATCACAGATCCTGAGCTTATTAAAGAAGTACTTAACAAAATGTATGACTTCCGAAAGCCGGATGTAAATCCGCTTTTCAAGTTACTAGTTAATGGTCTTGTAAACCTCGAGGGAGAACAGTGGAACAAGCACAGAAAGATAATAAATCCAGCATTccatttagaaaaattgaagATAATGTTACCAATATTCTTCAAAAGTTGCGATGATCTGATTAGCAAATGGGAGACAATGTTGTCATCAGATGGATCATGTGAAATAGATGTATGGCCTTTCCTTCAAAACTTGGCAAGTGATGTTATTTCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGACGGAGAATATTTCAACTTCAAATCGAGCAAGCTGAACTTGCAAAAACAGTTATGATGAAAGTTTACATCCCTGGATGGAGGTTTCTACCCACTCCTACCCATAGGAGGATGAAGGAAATTTCCAGAGATGTGAATGCTTCCCTTACCGATATGATTAACAAGAGAGAGAGCGCACTAAAAGCAGGTGAAGCAACTAAGGACGATTTATTAGGTATACTTTTGGAATCAAATCACAAGGAAATGAAAGAAAACGGCAACAATAAGAATGTCGGAATGACTCTTGAAGATGTAATAGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAGACCACTTCAGTTTTGCTTGTTTGGACAATGGTGTTGTTGAGTAGGTACCCCGATTGGCAAGCACGGGCAAGGGAGGAAGTATTACAAGTCTTCGGCAATAAAAAACCAGATTTTGATGGGCTAAGTCATCTTAAGATTGTTACCATGATTTTCTATGAGGTTCTTAGGTTATACCCACCAGTAATAGCACTAGCTCGAACTGCTCACAAAGATGTGAAACTCGGGAACCTATCATTACCTGCCGGAGTGCAGCTTTTCTTATCGATAATTTTGGTTCACCATGACGTAGAACTATGGGGTGATGATGCTAAGGTGTTCAATCCTGAGAGATTTTCTGAAGGTATTTTAAAAGCAACAAATGGAAAAAACGCATTTTTTCCATTTGGAGGGGGTCCTAGAATTTGCATTGGACAAAACTTTTCTTTATTGGAAGCAAAGATAGCAATAGCAATGATATTACAACATTTCTCATTCGAACTTTCACCAACTTACGCTCATGCACCTGCTACGGTAATTACGCTTCAACCGCAATATGGTGCTCATGTAATTCTGCCAATAATTCTCTTCACCGTGATTATACTTACTCTCACATGGGCATGGAGGTTTTTGAATTGGGTATGGTTTAAGCCAAAGAAGCTAGAAAAATTGCTAAGAGAACAAGGACTTAAAGGGAATTCATATAGATTTTTAATTGGAGATATAAAAGATTTTGTTAAGATGCAAAATGAAGCAACAGCTAAACCTATGAATCTTTCTGATGATATTGCTCCTCGTGTCTATTCCTTTGTCCATCAAAGTCTTGAAAAACATGGGAAGAATTCTTTTATCTGGCTTGGACCAGTACCAAGGTTGAATATCACGGATCCTGACCTAATTAAAGATGTACTTAACAAATACTACGACTTCCGAAAACCAAATGCGAATCCACTTGTCAAGTTACTAATTAATGGTCTTGTGAACCTCGAGGGAGAACAGTGGAGTAAGCATAGAAAGATAATAAATCCTGCATTCCATGTAGAAAAACTTAAGATCATGTTACCAATATTCTTCAAATGTTGCGATGATCTGATTAGCAAGTGGGAAACAATGTTGTCATCAGATGGATCATGTGAAATGGATGTATGGCCTTTCCTTCAAAACATGGCAAGTGATGTTATTTCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGACGAAGAATATTTCAACTTCAAATCGAGCAAGGTGAACTTGTAAAAACAGTTATACTGAAAGCATACATCCCTGGATGGAGGTTTCTACCCACTCCTACCCATAGGAGGATGAAGGAAATTGCCAGAGATGTGAATGCTTCCCTTACTGATATGATTACCAAGAGAGAGTGCGCACTAAAAGCAGGCGAAGCAACTAAGGACGATTTATTAGGCATACTTTTGGAATCAAATCACAAggaaattaaagaaaacaataacaacaataatgtCGGAATGAATCTTGAAGATGTAATAGAGGAATGCAAACTATTCTACTTTGCAGGGCAAGAGACCACTTCAGTTTTGCTTGTTTGGACAATTGTATTATTGAGTAGGTACCCTGATTGGCAAGCACGTGCGAGAGAGGAAGTATTCCAAGTCTTCGGCAACAACAAGAAACCGGATTTTGATGGGCTAAGTCATCTTAAGATTGTTACCATGATTTTGTATGAGGTTCTTAGGTTGTACCCACCAGTAATCGCACTATCTCGAACTTCTCACAAAGATATGAAACTTGGAAACCTAACATTACCTGCCGGAGTGCAGCTTTTCTTATCGATAATTTTGGTTCAACATGACATAGAACTATGGGGTGATGATGCTAAGGTGTTCAATCCTGAGAGATTTTCTGAAGGTGTTTTAAAAGCAACAAATGGAAAAAACGCATTTTTCCCATTTGGTGGGGGTCCTAGAATTTGCATTGGACAAAACTTTGCCATATTGGAAGCAAAGATAGCAATAGCAATGATATTACAACATTTCTCATTTGAACTTTCTCCTACCTATACTCATGCCCCAACTACGGTAGTTACGCTTCAACCGCAATATGGTGCTCATATAATTCTACGTAAATtgtaa 3078 0.3733 MATSTAIIFFTLMILVLTWAWRILNWLWFKPKKLEKLLREQGLKGNSYRLLVGDVKDLLKMRKEATSKPMNLSDDIVPRVYTYLQQSAIKYGKNSFIWFGPTPRLNITDPELIKEVLNKMYDFRKPDVNPLFKLLVNGLVNLEGEQWNKHRKIINPAFHLEKLKIMLPIFFKSCDDLISKWETMLSSDGSCEIDVWPFLQNLASDVISRTAFGSSYEEGRRIFQLQIEQAELAKTVMMKVYIPGWRFLPTPTHRRMKEISRDVNASLTDMINKRESALKAGEATKDDLLGILLESNHKEMKENGNNKNVGMTLEDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPDWQARAREEVLQVFGNKKPDFDGLSHLKIVTMIFYEVLRLYPPVIALARTAHKDVKLGNLSLPAGVQLFLSIILVHHDVELWGDDAKVFNPERFSEGILKATNGKNAFFPFGGGPRICIGQNFSLLEAKIAIAMILQHFSFELSPTYAHAPATVITLQPQYGAHVILPIILFTVIILTLTWAWRFLNWVWFKPKKLEKLLREQGLKGNSYRFLIGDIKDFVKMQNEATAKPMNLSDDIAPRVYSFVHQSLEKHGKNSFIWLGPVPRLNITDPDLIKDVLNKYYDFRKPNANPLVKLLINGLVNLEGEQWSKHRKIINPAFHVEKLKIMLPIFFKCCDDLISKWETMLSSDGSCEMDVWPFLQNMASDVISRTAFGSSYEEGRRIFQLQIEQGELVKTVILKAYIPGWRFLPTPTHRRMKEIARDVNASLTDMITKRECALKAGEATKDDLLGILLESNHKEIKENNNNNNVGMNLEDVIEECKLFYFAGQETTSVLLVWTIVLLSRYPDWQARAREEVFQVFGNNKKPDFDGLSHLKIVTMILYEVLRLYPPVIALSRTSHKDMKLGNLTLPAGVQLFLSIILVQHDIELWGDDAKVFNPERFSEGVLKATNGKNAFFPFGGGPRICIGQNFAILEAKIAIAMILQHFSFELSPTYTHAPTTVVTLQPQYGAHIILRKL 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04116 1025 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Tsu02g04116 1025 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 PRINTS E-class P450 group I signature 963 973 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 PRINTS E-class P450 group I signature 973 996 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 513 - -
Tsu02g04116 1025 PANTHER CYTOCHROME P450 FAMILY MEMBER 518 1022 - -
Tsu02g04116 1025 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 966 975 IPR017972 GO:0005506|GO:0016705
Tsu02g04116 1025 PANTHER CYTOCHROME P450-RELATED 10 513 - -
Tsu02g04116 1025 PANTHER CYTOCHROME P450-RELATED 518 1022 - -
Tsu02g04116 1025 SUPERFAMILY Cytochrome P450 586 1023 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 SUPERFAMILY Cytochrome P450 78 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 Gene3D Cytochrome P450 535 1025 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 Gene3D Cytochrome P450 27 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 PRINTS P450 superfamily signature 834 851 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 PRINTS P450 superfamily signature 887 898 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 PRINTS P450 superfamily signature 973 984 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 PRINTS P450 superfamily signature 964 973 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 Pfam Cytochrome P450 588 1002 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04116 1025 Pfam Cytochrome P450 81 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04116 Tsu-Chr2 48031681 48063769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04116 1 513 Cytochrome P450 AT3G14690 57.670 0.0 629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04116 02 48031681 48063769 Tsu02g04116 02 48031681 48063769 ECH