Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04115 ATGGAAATAACTTCTACAACTACAACATGCTTTCTCATAGTGGTCCCTTTGGTTCTTCTATGGGGATGGAAGCTTCTGAATTGGCTATGGTTAAGGCCAAAGAGACAAGAAAAGGTGTTGAGAGCACAAGGCCTTCAAGGAAATCCATACAAGGTTTTGGTTGGAGACACAAAAGAGATGATTAAGTTGATGATGGAAAATGCAAAATCTCCAATATTCACTAATTCTCTCTCAGATGATAAAGATGTCACACCACATGTTTTCACATTTATTCATCATATTTTCCACAAATTTGGCAAGAATTCTTTTTTGTGGGAAGGTCCAAATGCAAAAGTGATCATTACAAATCCTGACCAAATTAAGGAAATCTTCAACAACATGCATGACTTTGTGAAACCTAAGTTGAGTCCCCTTTTCAAGCTATTGGGCACCGGACTTTTTAATTATGAAGGCGAGAAATGGAGGATCCATCGAAAGATTATCAGTCCCGCTTTCTACTCCGAAAAATTGAAGATTATGTCACCCATATTCTACCAATGTTGTGATGAAACGATAAGCAAATGGGAAGAGATGTCTTCGGATGGGAAATTTGAAATTGATGTGTGGCCTTTCGTTCAAACTTTGACATGTGATGTCATTTCTAGAACAGCTTTTGGAAGTAGTTatgaagaaggaaaaagaatatttgaaCTTCTAAAAGAACAAGCTAAACTTATTATGAAATTACGCAATATTTACATTCCGGGTTGGagGTATCTACCAACAACTACACATAGGAGgatgacaaaaattgataaagataTGCAAGCATCACTAATGGCTATAATCAACAAACGAAAGAAAGCAATGATGGCTGGTGAAGTCCTAAACAATGATTTATTGGGCATACTTTTGGAAtcaaatcaaaaagaaatacaaGAAAATGGAAACAATAAGAATGTTGGTATGAGTGATCAAGAAGTACTTGAGGAATGCAATGCATTCTACCTTGGAGGACAAGAAACCACATCAGTTCTAATTGTTTGGACAATGATATTGTTGAGTAGATATCCTGATTGGCAAGCACGCGCTAGGGAGGAAGTCTTGCAAGTTTTTGGCAATCAAATGCTAAACAATGATGGGATAAGCCGCCTAAAAATTGTAACAATGATTCTCTACGAGGTATTAAGGTTATATCCACCTACAATTTACTTCAATCGAGTAGCTCGCAAAGATGTAAAACTTGGAAATCTTTTCCTACCTGCGGGGGTACATGTTTCTTTACCGATACTCTTGATTCACCACAATCGCGATATTTGGGGTGATGATGCTACCGAATTCAATCCAGAAAGATTTTCTGAAGGAATTGCAAAGGCAACAAAGGGACAAGTTACTTTTTTCCCATTTGGTTATGGTCATAGAGTGTGCCTTGGGCAAAACTTTGCTTTATTAGAAGCAAAGATTATTTTGTCACGGCTTCTACAACGTTTCTCATTTGAACTTTCACCTACATATGTTCATGCTCCAACAACTGTGTTCACTCTTAATCCAAAACATGGGGCTCATATCATTTTCCACAAATTATAG 1566 0.3595 MEITSTTTTCFLIVVPLVLLWGWKLLNWLWLRPKRQEKVLRAQGLQGNPYKVLVGDTKEMIKLMMENAKSPIFTNSLSDDKDVTPHVFTFIHHIFHKFGKNSFLWEGPNAKVIITNPDQIKEIFNNMHDFVKPKLSPLFKLLGTGLFNYEGEKWRIHRKIISPAFYSEKLKIMSPIFYQCCDETISKWEEMSSDGKFEIDVWPFVQTLTCDVISRTAFGSSYEEGKRIFELLKEQAKLIMKLRNIYIPGWRYLPTTTHRRMTKIDKDMQASLMAIINKRKKAMMAGEVLNNDLLGILLESNQKEIQENGNNKNVGMSDQEVLEECNAFYLGGQETTSVLIVWTMILLSRYPDWQARAREEVLQVFGNQMLNNDGISRLKIVTMILYEVLRLYPPTIYFNRVARKDVKLGNLFLPAGVHVSLPILLIHHNRDIWGDDATEFNPERFSEGIAKATKGQVTFFPFGYGHRVCLGQNFALLEAKIILSRLLQRFSFELSPTYVHAPTTVFTLNPKHGAHIIFHKL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04115 521 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04115 521 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04115 521 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04115 521 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04115 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 517 - -
Tsu02g04115 521 SUPERFAMILY Cytochrome P450 83 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04115 521 Pfam Cytochrome P450 72 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04115 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Tsu02g04115 521 Gene3D Cytochrome P450 33 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04115 521 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04115 521 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04115 521 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04115 521 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04115 521 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04115 521 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04115 521 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04115 521 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 15 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04115 Tsu-Chr2 48026516 48030243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04115 1 521 Cytochrome P450 AT3G14690 51.145 0.0 563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04115 02 48026516 48030243 Tsu02g04115 02 48026516 48030243 ECH