Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04114 atggaaTGGATTTCAAGCATAATTCTTATCTTTGTTACACTTTGTTTGATATGGGCATGGAAGTTGTTGAGTTTTTTGTGGTTAAGGCCAAAAAAGCTAGAGAAGTTGTTAAGAGAACAAGGGTTTCAAGGGAATCCATATAGGATTTTGCTTGGAGACACAAATGATCTTTTTAAGATGGAAAAAGAAGCAAGATCCAAATCAATGAATCTCACGGATGACATAGCGCCACGTGTCAGTCCTTACATCCAACATCATGTTAAAATTCATGGGAAGAATTCTTTTATTTGGTTTGGAATAAAACCAAGGGTAACTCTCACAGAACCTGAGCAAATAAAAGATGTATTGAACAAGATCTCTGAATTTCCAAAGACAAATTATAAGATTTTCAAGTTACTAGCTAGTGGTGTTGCTAGTCATGAGGGAGAAAAATGGAGCAAGCATAGAAGGCTAATCAACCCTGCTTTTCATCTAGAAAAATTAAAGATTATGACCCCAGCTTTCTTCACAAGTTGTAATGATTTGATTAGCAATTGGGAGGGAATGTTGTCTTCAGATGGATCATGTGAAATAGATGTATGGCCTTCGCTTCAGAATTTAGCTAGTGATGCTATTTCTCGAACCGCATTTGGAAGTAGTTatgaagaaggaaaaagaatatttcaacttcaaagagaacAAGCTGAACTTATAACCAAAGCTGTAATGAAATCTTTCATCCCTTTATGGATGTTTTTGCCTACTGTTTTCCATAAGAGGATGAATGAAGTTAACAACGATATAAAGTCTTCGCTTAAAGATATAATTAACAAGAGGGAGAAAGCATTAAAGAAAGGGGAATCAACTAAGAATGACTTATTGAGTATTCTTCTAGAGTCAAATCAAaaggaaattgaagaaaatgaaagcaACAAGAATGTGGGAATGAGTATTGAAGATGTAATTGAGGAATGCAAGTTGTTCTACTTTGCAGGACAAGAGACTACTTCAGTTTTGCTTGTATGGACAATGATATTGTTGAGTAGATACCCTGATTGGCAGGCACGTGCAAGAGATGAAGTATTGAATTTATTTGGCAATAAAAAACCTGATTTTGATGGGCTAAATAACTTAAAGATTGTCACCATGATTTTGTACGAGGTTCTTAGGTTATACCCACCCGTAATTGGCCTAGCTCGAGATGTTCAGAACGATGTAAAACTTGGAAATTTGACATTACCAGCCGGGGTCGAGGTTTTCTTACCAATTCTAATGCTTCACCATGATTGCGAACTATGGGGTGATGATGCTAAGATGTTCAATCCCGAGCGATTTTTTGGAGGAATTTCGAAAGCAACAAATGGTAGAgtttcattttttccatttggATGGGGTCCTAGAATTTGTTTAGGGCAAAATTTTTCTCTATTGGAAGCAAAGATGGCAATGGCAATGATTTTGCAACATTTCTCATTTGAACTTTCACCAACATATGCTCACGCTCCCGCCACAACGATTACTCTTCGACCACAATATGGTGCTCATATTATTCTACACAAAGtgcaaacataa 1551 0.3449 MEWISSIILIFVTLCLIWAWKLLSFLWLRPKKLEKLLREQGFQGNPYRILLGDTNDLFKMEKEARSKSMNLTDDIAPRVSPYIQHHVKIHGKNSFIWFGIKPRVTLTEPEQIKDVLNKISEFPKTNYKIFKLLASGVASHEGEKWSKHRRLINPAFHLEKLKIMTPAFFTSCNDLISNWEGMLSSDGSCEIDVWPSLQNLASDAISRTAFGSSYEEGKRIFQLQREQAELITKAVMKSFIPLWMFLPTVFHKRMNEVNNDIKSSLKDIINKREKALKKGESTKNDLLSILLESNQKEIEENESNKNVGMSIEDVIEECKLFYFAGQETTSVLLVWTMILLSRYPDWQARARDEVLNLFGNKKPDFDGLNNLKIVTMILYEVLRLYPPVIGLARDVQNDVKLGNLTLPAGVEVFLPILMLHHDCELWGDDAKMFNPERFFGGISKATNGRVSFFPFGWGPRICLGQNFSLLEAKMAMAMILQHFSFELSPTYAHAPATTITLRPQYGAHIILHKVQT 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04114 516 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04114 516 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04114 516 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04114 516 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04114 516 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04114 516 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04114 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 7 512 - -
Tsu02g04114 516 Pfam Cytochrome P450 89 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04114 516 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04114 516 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04114 516 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04114 516 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04114 516 Gene3D Cytochrome P450 76 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04114 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Tsu02g04114 516 PANTHER CYTOCHROME P450-LIKE 7 512 - -
Tsu02g04114 516 SUPERFAMILY Cytochrome P450 78 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04114 Tsu-Chr2 47958388 47961889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04114 1 514 Cytochrome P450 AT3G14690 55.792 0.0 617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04114 02 47958388 47961889 Tsu02g04114 02 47958388 47961889 ECH