Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04093 ATGTCAGAGATTGTTCTTGCTGAACCAATTCATTTTGAGCAAGGAGAGTCATCAACATCTagacaacaacatcatcatcatgaatATGATTATGAATATGATAATACTATGGCTATTACTACCAATAGTGTCAGTAGTAGCAACAATGGTGAACAGCTTCAACCAGGACCCTTTGACAGTGAAAGGTTGCCAACTGTTTTTGCTTCTGAGATTCAGCGGTTTCTTCGTGTTGCTAACTTGCTTGAAAGAGAGGAGCCTCGTGTTGCCTATCTTTGCCGAGTTCACGCCTTTGTAATTGCACACAATTTGGATAAGAATTCTAGTGGAAGAGGTGTTAGACAATTCAAAACTTCACTCCTTCATAGACTTGAACAGGATGAAAATGCAACAAAAAGGGGTGGAATAGGTGATATTCGTGAACTTAAGCGAGTTTACCATGTCTATAGAGATTATTTTGCTCGAAATAATAAAGCATTTGATCTTGAACAAAGTCGTAGGGAGAAATTGATAAATGCAAGAATTATTGCTTCTGTTCTGTTTGAGGTCCTAAAAACGGTCACTAACACACCGAGTAATCAGGCACTTACTGAAGGAAATGCAATCCACAAAAAAACCGAGTTTAACATTCTTCCACTTGAGCAAGGAGGAATTCAGCATGCAATCATGCAGCAGCCTGAGATTAAGGCTGCCATTGCAGTTATTCGCAACATTCGAGGTTTACCCCCGGCCCAAGATTTCAAGAAACATGGAGCCTTTATagatttgtttgattttcttcagcaTTGTTTTGGATTCCAGGAAGCTAATGTGGCAAACCAAAGGGAACATTTGATTCTACTGCTAGCAAACATGCAGACTAGGCAAACTCACCACCAGACATCTGCAATGAAGTTAGGAGAAGGAGGTGTGGATGAATTGATGAGAAAATTCTTCAAAAATTATACAACCTGGTGCAagtttttggaaagaaaaagcaATATCCGCTTACCTTTTGTAAAACAGGAAGCAcaacaatataaaattttatacatTGGGCTTTACCTGCTCATATGGGGGGAGGCAGCTAATTTGAGGTTCATGCCGGAATGTCTGTGCTATATCTTTCACCATATGTCATATGAAATGCATGGAGTTTTAAGTGGTGCTATTAGCTTAACAACATGGGAAAAGGTCATGCCAGCGTATGGAAACGAACCAGAATCGTTCCTTAATAATGTTGTCACGCCTATATACAATGTTATAAAAAAGGAAGTTGAAAATAGCAAAGGTGGGACAACCGACCATTCTGCGTGGAGAAACTATGATGATCTGAATGAGTACTTCTGGTCTCCTGATTGTTTCGGAATCGGTTGGCCCATGCGTGATGAGGAccatgattttttctttgtaaaaaCCAAAGATAAAACTGATTTCAGGAAGGCTCTTGTATCACCTGTTCAAaagattgaaaagaaaaagaagaagaagaaaaagacaGAAAAGAagGAAAACGATGAAAATCCGGAAAAGAATGAACGACAATGGCTAGGAAAGACAAATTTTGTAGAGATTCGTTCGTTTTTGCAAATTTTTAGAAGCTTTGATAGAATGTGGAGTTTTTATATTCTATCCCTTCAGGCCATAATAATCATGGCCTGTCATGACTTGGGATCTCCACTTCAGTTGCTTGATGCCGCAGTATTTGAGGACATCATCAGCATCTTTATCACCTCAGCAATTCTTAAATTTATTCAAGCAATTTCAGACATTGCCTTTACTTGGAAAGCAAGATACACCATGGAACATTCACAAAAAGTGAAACTTCTGGTGAAGTTGGCATTTGCCATTATATGGAATATTATTCTTCCTGTGTGCTATTCTAATTCGAgaagaaaatattgttattACACCAAGTATGGAAGTTTGCAATGGTGCTTTACTTCTTATATGGTTGCTGCTGTAATATACTTGACAAGTAATGCAGCTGAagttgtgttattttttgtaCCTGCTATGGGAAAATATATCGAGGTCTCTAATAACAAGATATGCAAAGTTTTGGCTTGGTGGATTCAACCGAGAATCTATGTCGGACGAGGAATGCAAGAAGACCAACTTTCTGTTATAAAGTACACGTTGTTTTGGATATTGGtgttattttgtaaatttatgtTCAGCTATAGTTTTGAGATAAAACCACTCATAGGACCAACTAGACAGATCATGAAAATTGGTGTAAGAAAGTATGAATGGCATGAACTTTTTCCAAGAGTAAAATATAATGCTGGTGCAATTGTTGCTGTATGGAGTCCTGTAGTAATGGTATATTTTATGGACACACAAATTTGGTATTCTGTTGTCTGTACAATAGTTGGCGGAGTTTATGGAATTATGCATCACCTTGGTGAGATAAGGACACAAGGAATGCTTAGAACTAGATTCGACAACTTGCCAGCAGCATTTGATGTCTCTCTGAATCCACCGTCTTCTAAACGCggtaaaaagaaaagaaaaggtttcCTCAGCAATATATTTCAAAAGCTTCCTGATGAAAAAAATGCTATTGCGAAATTTGTGGTAATATGGAATCAAATTATAAGCCATCTCCGTCTTGAAGACTTAATTAGTAACAGAGAAATGGACTTAATGATGATGCCTGTGTCTTCAGAATTGTTTTCCCGAACGGTTCTTTGGCCTATTTTCCTCTTGGCAAACAAGTTTTCTACAGCTTTGACCATTGCTAAAGATTTTGAGGGAAAGGAAGAAGCTCTTGtcagaaaaatttcaaaagacaaATACATGTTTTATGCTGTAAGAGAGTGCTACCAGTCACTGAAATATGTTCTCGAGATTCTTATTGTCGGTAGCCAGGAGAAAAGGATTATATGCGATATACTAAGCGAAATTGAAAAAAGTATCGAAGAATCAACTCTTCTTAAGAACTTTAACATGAAGGTTCTCCCAGCTCTACATGTTAAGGTCATTGAGCTAGCTGAACTTCTGATTGAGGGAGATAAAGACAATCGGCACAAAGTTGCGAAGGCTTTACTCGATATGTTTGAGCTGGTAACAAATGATATGATGGATGATTCAAGAACATTGGATACATCACACTTTCCCGAACAAAATGAGTGTGGCTTTGTCTATTTTAGAGATGATGATCAACTATTTTCCAGTGAAGAAATTAATAGTGAATCCTTTCCATTTTCCAATGAAAGTTGTGTCCATTTTCCCTTGCCAGAAGGCCCTTTGACGGAAAAGATCAAGCGATTTCATTTATTAGTTACCGTCAAAGAGACAGCAATGGACATACCTGTGAACTTAGATGCTCGCCGGCGCATATCATTCTTTGCTACTTCTCTGTTTACAGATATGCCAGATGCTCCAAAAGTGCATAGTATGCTGCCATTTAGTGTTATAACTCCACACTACATGGAAGACATAAACTTTTCAATGAAGGAGCTTGGTTCGGATAAAGAAGAGGACTCAATCATTTTTTACATGCAAAAGATATATCCAGatGAATGGACAAACTTTTTGGAACGAATGTGTTGCGATAACCGAAAGAgtttagaaaatgaaaacaagtcAGAAGAGCTTAGATCGTGGGCTTCGTTCAGGGGACAGACACTAGGCAGAACAGTTAGAGGGATGATGTACTACAGAGAAGCCTTAAAATTACAAGCATTTCTCGACATGGCTGAAGATGAAGATATTCTTGAAGGTTATGAGACGGCTGAAAAGGGTAACCGAGCATTATTTGCTCGTCTAGAAGCACTAGCAGACTTGAAATACACCTATGTCGTTACCTGTCAATCATTTGCATTGCAAAAGGCGATGAATGATCCTcgttataaagatacaattgaGTTAATGACAagATATCCGTCTCTTCGTGTTTCTTATGTCGAGGAAAAGGAGGAGATTGTTCAGGGTAGACCTATCAAAGTATATTATTCTAAACTGGTTAAAGTTGTCAATGGTTTTGAACAGACGATATATCAAATAAAACTTCCAGGACCGCCACAGCTTGGAGAAGGGAAACctgaaaatcaaaacaatgcaATAATATTCACTCGTGGCGAAGCTCTCCAAACAATTGATATGAACCAAGATAATTACTTGGAAGAAGCTCTAAAAATGAGAAACCTCCTCCAAGAGTTTCTTAAGCGCCAAGGACGGAGGCCTCCTACAATACTTGGTTTAAGGGAACATATTTTCACAGGAAGTGTGTCGTCTCTGGCGTGGTTCATGTCATATCAGGAAACCAGCTTTGTCACTATTGGTCAAAGGCTTCTGGCTAATCCTCTCAGGGTGCGGTTCCATTACGGCCATCCAGATGTATTTGACAGAATTTTTCATATTACAAGAGGAGGAATAAGCAAAGCAtctaaaacaattaatttgaGTGAAGATGTTTTTGCTGGATTTAATTCTACTTTAAGAAGAGGGTGTATTTCCTACCACGAATACTTGCAAATTGGAAAAGGCCGCGATGTGAGTCTAAACTCGATTTCAAAATTTGAAGCCAAGGTAGCAAATGGAAACAGTGAGCAAACTATAAGTCGTGACATTTTCCGCCTTGCACGACAATTCGATTTTTTCAGGATGCTTTCTTGTTATTTCACTACAATTGGGTTTTACTTCAGCAGCTTGATATCAGTACTAGGAATATACGTATTTCTCTACGGACAGTTATACCTAGTGCTTAGTGGATTAGAGAGAGCACTTATCATTGAAGCAAGAATCAAGAATGTACAGTCCTTAGAAACAGCTCTTGCATCTCAATCATTCATACAACTTGGACTTCTAACAGGCTTACCAATGATGATGGAAATAGGCCTTGAGAGAGGTTTCCTCACAGCCTTTAAAGATTTTGTCCTCATGCAGTTGCAGCTCGCCGCTGTTTTCTTCACCTTCTCCCTTGGATCAAAAACACATTACTATGGTAGAACAATTTTGCATGGAGGTGCAAAATACAGACCAACTGGACGCAAAGTTGTCTTCCATGCTAGCTTCACCGAAAACTATAGATTATATTCGAGAAGTCACTTTGTAAAGGCGTTCGAGCTAATGCTGCTTTTGATTGTTTATAACATGTTCAGGAAATCTTATCAAAGTAACATGACATATGTGTTGATAACTTACGCGATTTGGTTCATGTCTTTGACTTGGTTGTGTGCGCCTTTTCTTTTCAACCCTGCCGGATTCAGCTGGACAAAGGCTGTAGATGATTGGAAAGAGTGGAATAAGTGGATTAGGCAACAAGGTGGATTGGGAATCCATCAGGATAAAAGTTGGCATTCTTGGTGGTATGATGAACAAGCTCATCTTCGTCGATCGAGTCTATATTCGAGGTTTGCCGAGATATTGCTTTCTCTTCGTTTCTTTATCTATCAGTATGGTTTGGTCTATCACCTTGACATCACTCAGCAAAGCAAAAACTTGCTGGTTTATGTCTTTTCGTGGCTTGTGATTCTTGGAATTTTCCTCTTGGTGAAGGTTGTTAACATAGGAAGGAACCTACTTAGTGCTAATTATCAGCTTGGATTCAGATTTTTCAAAGCAATCCTGTTTGTGGCTGTTCTAGCCCTCATCATTTCTCTTTCAATCATATGTCAACTGTCAGTGTCAGACCTTTTTGTTTGCTGTCTGGCATTCATGCCAACTGCATGGGGACTAATACAGATTGCACAAGCTATAAGGCCAAAAATAGAGCATACAGGATTATGGGACTTCACACGTGCACTTGCAAGAGAATTTGATTATGGAATGGGAATAGTACTTTTTGGACCTATAGCTATTTTGGCATGGTTACCAATTATTAAAGCTTTTCATGCTCGTATCCTTTTCAATGAAGCATTCAAAAGGCACTTGCAAATTCAACCACTTCTCaatgcaaagaagaagaagcataGACCTTGA 5904 0.3692 MSEIVLAEPIHFEQGESSTSRQQHHHHEYDYEYDNTMAITTNSVSSSNNGEQLQPGPFDSERLPTVFASEIQRFLRVANLLEREEPRVAYLCRVHAFVIAHNLDKNSSGRGVRQFKTSLLHRLEQDENATKRGGIGDIRELKRVYHVYRDYFARNNKAFDLEQSRREKLINARIIASVLFEVLKTVTNTPSNQALTEGNAIHKKTEFNILPLEQGGIQHAIMQQPEIKAAIAVIRNIRGLPPAQDFKKHGAFIDLFDFLQHCFGFQEANVANQREHLILLLANMQTRQTHHQTSAMKLGEGGVDELMRKFFKNYTTWCKFLERKSNIRLPFVKQEAQQYKILYIGLYLLIWGEAANLRFMPECLCYIFHHMSYEMHGVLSGAISLTTWEKVMPAYGNEPESFLNNVVTPIYNVIKKEVENSKGGTTDHSAWRNYDDLNEYFWSPDCFGIGWPMRDEDHDFFFVKTKDKTDFRKALVSPVQKIEKKKKKKKKTEKKENDENPEKNERQWLGKTNFVEIRSFLQIFRSFDRMWSFYILSLQAIIIMACHDLGSPLQLLDAAVFEDIISIFITSAILKFIQAISDIAFTWKARYTMEHSQKVKLLVKLAFAIIWNIILPVCYSNSRRKYCYYTKYGSLQWCFTSYMVAAVIYLTSNAAEVVLFFVPAMGKYIEVSNNKICKVLAWWIQPRIYVGRGMQEDQLSVIKYTLFWILVLFCKFMFSYSFEIKPLIGPTRQIMKIGVRKYEWHELFPRVKYNAGAIVAVWSPVVMVYFMDTQIWYSVVCTIVGGVYGIMHHLGEIRTQGMLRTRFDNLPAAFDVSLNPPSSKRGKKKRKGFLSNIFQKLPDEKNAIAKFVVIWNQIISHLRLEDLISNREMDLMMMPVSSELFSRTVLWPIFLLANKFSTALTIAKDFEGKEEALVRKISKDKYMFYAVRECYQSLKYVLEILIVGSQEKRIICDILSEIEKSIEESTLLKNFNMKVLPALHVKVIELAELLIEGDKDNRHKVAKALLDMFELVTNDMMDDSRTLDTSHFPEQNECGFVYFRDDDQLFSSEEINSESFPFSNESCVHFPLPEGPLTEKIKRFHLLVTVKETAMDIPVNLDARRRISFFATSLFTDMPDAPKVHSMLPFSVITPHYMEDINFSMKELGSDKEEDSIIFYMQKIYPDEWTNFLERMCCDNRKSLENENKSEELRSWASFRGQTLGRTVRGMMYYREALKLQAFLDMAEDEDILEGYETAEKGNRALFARLEALADLKYTYVVTCQSFALQKAMNDPRYKDTIELMTRYPSLRVSYVEEKEEIVQGRPIKVYYSKLVKVVNGFEQTIYQIKLPGPPQLGEGKPENQNNAIIFTRGEALQTIDMNQDNYLEEALKMRNLLQEFLKRQGRRPPTILGLREHIFTGSVSSLAWFMSYQETSFVTIGQRLLANPLRVRFHYGHPDVFDRIFHITRGGISKASKTINLSEDVFAGFNSTLRRGCISYHEYLQIGKGRDVSLNSISKFEAKVANGNSEQTISRDIFRLARQFDFFRMLSCYFTTIGFYFSSLISVLGIYVFLYGQLYLVLSGLERALIIEARIKNVQSLETALASQSFIQLGLLTGLPMMMEIGLERGFLTAFKDFVLMQLQLAAVFFTFSLGSKTHYYGRTILHGGAKYRPTGRKVVFHASFTENYRLYSRSHFVKAFELMLLLIVYNMFRKSYQSNMTYVLITYAIWFMSLTWLCAPFLFNPAGFSWTKAVDDWKEWNKWIRQQGGLGIHQDKSWHSWWYDEQAHLRRSSLYSRFAEILLSLRFFIYQYGLVYHLDITQQSKNLLVYVFSWLVILGIFLLVKVVNIGRNLLSANYQLGFRFFKAILFVAVLALIISLSIICQLSVSDLFVCCLAFMPTAWGLIQIAQAIRPKIEHTGLWDFTRALAREFDYGMGIVLFGPIAILAWLPIIKAFHARILFNEAFKRHLQIQPLLNAKKKKHRP 1967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04093 1967 SMART FKS1_dom1_2 338 454 IPR026899 -
Tsu02g04093 1967 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 47 1964 - -
Tsu02g04093 1967 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 340 451 IPR026899 -
Tsu02g04093 1967 PANTHER CALLOSE SYNTHASE 8-RELATED 47 1964 - -
Tsu02g04093 1967 Pfam Vta1 like 70 192 IPR039431 -
Tsu02g04093 1967 Gene3D - 58 211 IPR023175 -
Tsu02g04093 1967 MobiDBLite consensus disorder prediction 482 505 - -
Tsu02g04093 1967 Coils Coil 479 499 - -
Tsu02g04093 1967 Pfam 1,3-beta-glucan synthase component 1097 1779 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04093 Tsu-Chr2 47590688 47604958 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04093 51 1963 Glycosyltransferase AT3G14570 66.975 0.0 2680
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04093 02 47590688 47604958 Tsu02g04093 02 47590688 47604958 ECH