Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04017 ATGGCAGATGAAGTGATTCTACTAGATTTTTGGCCTAGTCCATTTGGAATAAGAGTGAGAATAGCCCTTGCTGAAAAGGGTATCAAATATCAATACATAGAGGAAGATTTGATGTCAATGAAAAAGAGCCCTTTGTTACTAGAAATGAACCCGGTTCACAAGAAATCCCCGGTTCTCATTCACAATGGTAAACCCATTTGTGAATCTCTAATTGCTGTTCAGTATATTGATGAAGTTTGGAATGATGGATCTCCTTTGTTGCCTTCTGATCCTTATCAGAGATCACAAGCTTTATTCTGGGCTGACTATGTTGACAAAAAGATTTATGCAATTTCAAGGAACATTTGTGTCAAAAAGGGAGAAGAACAAGAAGTTGCAAAGAAGGAATTCATAGAAACTCTCAAATTGTTGGAGGGACAGTTGGGAGACAAGACTTATTTTGGAGGAAACAAATTTGGTTATGTGGATATATCACTCATCCCATTCTATGGTCGATTCAAAGCCATTGAGATCTTTGGTAACATTGATATAGAGAGTGAGTGTCCTAAGTTCATTGTTTGGGCAAAGAGATGCATGAAGATTGAGAGTGTTTTCATGTCTCTTCCAGAAAAAGATAAGCTCTATGAGTTCACTGTGGAGATGAGAAAGAAGTTAGGCATTGAGTAG 666 0.3754 MADEVILLDFWPSPFGIRVRIALAEKGIKYQYIEEDLMSMKKSPLLLEMNPVHKKSPVLIHNGKPICESLIAVQYIDEVWNDGSPLLPSDPYQRSQALFWADYVDKKIYAISRNICVKKGEEQEVAKKEFIETLKLLEGQLGDKTYFGGNKFGYVDISLIPFYGRFKAIEIFGNIDIESECPKFIVWAKRCMKIESVFMSLPEKDKLYEFTVEMRKKLGIE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04017 221 SFLD Glutathione Transferase (cytosolic) 2 219 IPR040079 -
Tsu02g04017 221 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 214 - -
Tsu02g04017 221 SUPERFAMILY Thioredoxin-like 5 109 IPR036249 -
Tsu02g04017 221 CDD GST_C_Tau 91 210 IPR045074 GO:0004364|GO:0006749
Tsu02g04017 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 218 IPR010987 -
Tsu02g04017 221 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Tsu02g04017 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Tsu02g04017 221 SUPERFAMILY GST C-terminal domain-like 78 218 IPR036282 -
Tsu02g04017 221 Pfam Glutathione S-transferase, N-terminal domain 5 78 IPR004045 -
Tsu02g04017 221 CDD GST_N_Tau 5 80 - -
Tsu02g04017 221 Gene3D Glutaredoxin 1 89 - -
Tsu02g04017 221 Pfam Glutathione S-transferase, C-terminal domain 126 190 - -
Tsu02g04017 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 214 IPR045073 -
Tsu02g04017 221 Gene3D - 90 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04017 Tsu-Chr2 46711994 46713317 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04017 1 221 Glutathione S-transferase Gene Family AT1G17180 66.516 5.98e-106 303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04017 02 46711994 46713317 Tsu02g04017 02 46711994 46713317 ECH
Tsu02g04017 02 46711994 46713317 Tsu08g01666 08 19888497 19890182 PCT