Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04013 ATGGCAGATCAAGTGACTCTGTTAGATTTCTGGCCAAGTCCATTTGGTATGAGAATCAGAATAGCACTTGCTGAAAAGGGTATCAAATATGAGTATAAAGAAGAAGACTTAAGGAACAAAAGCCCTTTGTTGTTACAAATGAATCCTGTTCATAAGAAAATCCCTGTTCTTATTCACAATAGTAAACCCATTTGTGAATCATTGATTGCTGTTCAGTATATTGATGAAGTTTGGAATGATAAATCTCCTCTTTTGCCTTCTGATCCTTATCAGAAATCACAAGCTAGATTCTGGGCTGATTATGTTGACAAAAAGATATATGAAGTTGGAAGGAAACTTTGGACCAAAAAAGGAGAAGAACAAGAAGCTGCCAAGAAGGAATTCATAGAAGCCATCAAATTGTTGGAGCAAGAGTTGGGAGACAAGACTTATTTTGGAGGAGATAAGCTTGGTTTTGTTGATGTAGCACTCATTCCATTctacacttggtttaaaggcTATGAGACTTTTGGTAACTTCAATGTAGAGAAGGAAAGTCCCAAGTTCATTGCTTGGGCCAAGAGATGCATCCAGATTGAGAGTGTTTCTAAGTCTCTTCCTGATCAGGATAAGGTCTATGACTTCATTGTAGAGATCAGGAAGAAGATTGGTGTTGAGTAG 660 0.3636 MADQVTLLDFWPSPFGMRIRIALAEKGIKYEYKEEDLRNKSPLLLQMNPVHKKIPVLIHNSKPICESLIAVQYIDEVWNDKSPLLPSDPYQKSQARFWADYVDKKIYEVGRKLWTKKGEEQEAAKKEFIEAIKLLEQELGDKTYFGGDKLGFVDVALIPFYTWFKGYETFGNFNVEKESPKFIAWAKRCIQIESVSKSLPDQDKVYDFIVEIRKKIGVE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04013 219 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Tsu02g04013 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 213 - -
Tsu02g04013 219 Pfam Glutathione S-transferase, C-terminal domain 122 188 - -
Tsu02g04013 219 Coils Coil 118 138 - -
Tsu02g04013 219 CDD GST_N_Tau 5 78 - -
Tsu02g04013 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 213 IPR045073 -
Tsu02g04013 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Tsu02g04013 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Tsu02g04013 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Tsu02g04013 219 Gene3D Glutaredoxin 1 87 - -
Tsu02g04013 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Tsu02g04013 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Tsu02g04013 219 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
Tsu02g04013 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Tsu02g04013 219 Gene3D - 88 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04013 Tsu-Chr2 46690346 46692154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04013 1 215 Glutathione S-transferase Gene Family AT1G78380 69.302 3.26e-115 326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04013 02 46690346 46692154 Tsu02g04013 02 46690346 46692154 ECH
Tsu08g01666 08 19888497 19890182 Tsu02g04013 02 46690346 46692154 PCT