Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04011 ATGACTGATGAAGTGATTCTTCTAGATTTCTGGCCAAGTCCATTTGGTATGAGAGTCAGAATAGCACTTGCTGAAAAGGGTATCAAATATGAGTACAAAGAAGAAGACTTGATTTCGAACAAGAGCCCTTTGTTGCTACAAATGAACCCGGTTCACAAGAAAGTCCCGGTTCTCATCCACAATGGTAAACCAATTGCTGAATCTCTAATTGCTGTTCAGTATATTGATGAGGTTTGGAATGATAAATCTCCTTTGTTGCCTTCTGATCCTTATCAGAGATCACAAGCTAGATTCTGGGCTGATTATGTTGACAAGAAGATATATGAAGCTGGAAGTAACCTTTGGACCAAAAAAGGAGAAGAGCAAGAAGCTGCCAAGAAGGAATTCATAGAAGCCATCAAATTGTTGGAGCAAGAGTTGGGAGACAAGACTTATTTTGGAGGAGACAAGCTTGGTTTTGTTGATGTAGCACTCATTCCATTCTACACTTGGTTCAAAGGCTATGAGACTTTTGGCAACATCAATGTAGAGAAGGAAAGCCCCAAGTTCATTGCTTGGGCCAAGAGATGCATCAAGATTGAAAGTGTTTCCAAGTCTGTTCCTGATCAGGATAAGGTCTATGATTTCATTGTGCAGATCAGGAAGAAGATAGGCATTGAATAA 663 0.3997 MTDEVILLDFWPSPFGMRVRIALAEKGIKYEYKEEDLISNKSPLLLQMNPVHKKVPVLIHNGKPIAESLIAVQYIDEVWNDKSPLLPSDPYQRSQARFWADYVDKKIYEAGSNLWTKKGEEQEAAKKEFIEAIKLLEQELGDKTYFGGDKLGFVDVALIPFYTWFKGYETFGNINVEKESPKFIAWAKRCIKIESVSKSVPDQDKVYDFIVQIRKKIGIE 220
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04011 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Tsu02g04011 220 Gene3D Glutaredoxin 1 88 - -
Tsu02g04011 220 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Tsu02g04011 220 SFLD Glutathione Transferase (cytosolic) 2 218 IPR040079 -
Tsu02g04011 220 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 214 - -
Tsu02g04011 220 Gene3D - 89 220 - -
Tsu02g04011 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 217 IPR010987 -
Tsu02g04011 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Tsu02g04011 220 Coils Coil 119 139 - -
Tsu02g04011 220 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Tsu02g04011 220 SUPERFAMILY GST C-terminal domain-like 77 217 IPR036282 -
Tsu02g04011 220 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Tsu02g04011 220 Pfam Glutathione S-transferase, C-terminal domain 123 189 - -
Tsu02g04011 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 214 IPR045073 -
Tsu02g04011 220 CDD GST_N_Tau 5 79 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu02g04011 Tsu-Chr2 46644774 46679397 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04011 1 220 Glutathione S-transferase Gene Family AT1G17180 65.000 1.89e-111 317
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04011 02 46644774 46679397 Tsu02g04011 02 46644774 46679397 ECH