Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03993 ATGGAAGAACCAACATTTCTATTCCCACCCCCCGATTCCGACTTAGACCTCAGTTTCACCAGCACAACCACCGACCGCACTTTCACCTCCTCCTCCGCTCGCACCAGTTTAGCTCGCACAAGCAGTCTTGCTCTCAGTTTCAACGACCGTCTCTCAACCGCTTCCGCCGCTGCAACAGACACTGTTTCCTCTGCCATCATCCGCCGTCCTCACCGTAGTTCTGATCCAAACTGGACTGCTATTAAGGCTGCTACAAATCTCTCTTCTGACGGACGACTTCATCTCCGTCATTTAAAACTTCTCCGTCATCTTGGCTCCGGTGATCTCGGCCGTGTTTTTCTCTGTCGCCTCCGTGATTACGACGGCGCTAATTTTGCACTTAAAGTTGTTGATAAAGATCTTCTTACTCCTAAGAAATTCTCTCACGCGGAAACGGAGGCGGAAATTCTTCACGCGCTTGATCATCCTTTTCTACCTACGCTATACGCGCGTATTGATGTCTCTCATTACACGTGTCTTCTTATAGATTATTGTCCTGGTGGTGATCTCCACTCGCTCCTCCGAAAACAGCCGGGAAACCGACTCACGATCTCGGCAGCGCGTTTTTTCGCAGCCGAGATTCTTGTTGCGCTCGAGTATCTTCACGCGCTCGGCGTTGTGTACCGTGACTTGAAACCTGAGAATGTGCTTCTGCGCGAAGATGGACACGTCATGCTTTCTGATTTTGATCTTTGCTTTAAAGCTGATGTGGCACCTACTTTTGAGTGTTGTAATGTTCAAAAAACTCGTGTAGGTTCCACTTACGGTTGTTTCGGTTATAATGGATCAAGATCTCGCGATTCTTGTAGGCGGGTTGTGGCAGAGTTTGTTGCTGAACCAACTATGGCGTTTTCACGGTCGTGTGTTGGGACCCACGAGTATTTAGCGCCAGAGCTTGTTTCGGGTAACGGTCATGGTAATGGTGTGGATTGGTGGGCTTTTGGGGTTTTTATTTATGAGTTGTTATATGGAACGACACCATTTAAAGGATGTAGCAAGGAGGGCACGCTGCGCAATATAGCATCTAATAAGGACGTGATGTTCCACGTGGCGGAGAGTGAAGAGGTAGGGATGATAGAAGCGAGGGATTTGATAGAGAAGTTGTTAGTTAAAGATCCTAAGAAGAGACTAGGGTGCGTTAGAGGCGCGACCGATGTTAAACAACACCCTTTTTTCGATGGAATTAAGTGGCCTTTGATTAGGACCTATAAGCCACCTGAAGTGAAGGGACTATTGAGGAGGAAAAAATCCGATTCACATTTGAGTCATGTGACTAGTAAAAAGAAGAGAGGATGGTGGAAGAAGCTTGGATgtgcattaaaaaataaaggagcTAGATTTGATTTACTTTCAAACTATAGTAATAATAATCATTATTGTTATGTTAATAATAGTAAGGTTAGGTAA 1446 0.453 MEEPTFLFPPPDSDLDLSFTSTTTDRTFTSSSARTSLARTSSLALSFNDRLSTASAAATDTVSSAIIRRPHRSSDPNWTAIKAATNLSSDGRLHLRHLKLLRHLGSGDLGRVFLCRLRDYDGANFALKVVDKDLLTPKKFSHAETEAEILHALDHPFLPTLYARIDVSHYTCLLIDYCPGGDLHSLLRKQPGNRLTISAARFFAAEILVALEYLHALGVVYRDLKPENVLLREDGHVMLSDFDLCFKADVAPTFECCNVQKTRVGSTYGCFGYNGSRSRDSCRRVVAEFVAEPTMAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFIYELLYGTTPFKGCSKEGTLRNIASNKDVMFHVAESEEVGMIEARDLIEKLLVKDPKKRLGCVRGATDVKQHPFFDGIKWPLIRTYKPPEVKGLLRRKKSDSHLSHVTSKKKRGWWKKLGCALKNKGARFDLLSNYSNNNHYCYVNNSKVR 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03993 481 Gene3D Transferase(Phosphotransferase) domain 1 299 424 - -
Tsu02g03993 481 PANTHER FLIPPASE KINASE 1-RELATED 11 435 - -
Tsu02g03993 481 PANTHER SERINE/THREONINE-PROTEIN KINASE WAG1 11 435 - -
Tsu02g03993 481 SUPERFAMILY Protein kinase-like (PK-like) 77 421 IPR011009 -
Tsu02g03993 481 Gene3D Phosphorylase Kinase; domain 1 97 181 - -
Tsu02g03993 481 ProSiteProfiles Protein kinase domain profile. 98 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03993 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Tsu02g03993 481 Pfam Protein kinase domain 100 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03993 481 SMART serkin_6 98 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03993 481 CDD STKc_phototropin_like 105 421 - -
Tsu02g03993 481 Gene3D Transferase(Phosphotransferase) domain 1 182 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03993 Tsu-Chr2 46378458 46379934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03993 1 478 AGC Kinase Gene Family AT3G14370 64.694 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tsu02g03993 Pkinase 7.2e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03993 02 46378458 46379934 Tsu02g03993 02 46378458 46379934 ECH