Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03988 ATGGAAGATAATGAATGGAATCACTATGATCCTCTTCTTCTCACTGACGTTTcttttcaacaacaacaaaccatTTCCACTAGTGTATCACAATTATCTCTTAGCTCTCTGAATTCAGCTATGGAGGCAGATTCCCAATCTTGTGGTGGAAACCCTAGTTATGGATTGTCTCCGGAAAATGAAAGCTTTGAAAGGAACAGTTTACAATTTGATGACCCAATTGTGAAAAATTTAGTTGATgGACGATCGATATTAGGGTATTCTATGAATTCGCCGGATTTGGTGATCTGTGGTGGCTCACCAGATATTGCTGGAATGACTTATTGTGATTCTCCTGAGATTTCGAAGAGCAAAAATTGCTTCAATGCATCTATGGAGCTTTCTCTTGAGAATGGAATCAATGCATCTGAAGTTGAAGTTTGCAATGTTCATAAGACTCCAACTGTTAAATTTTCCAATTTGTGTCAAACTATTGAGCCGGAGGAAGAGTTAATATCACCTGAAGCCTCATTCGAGCTTCATCCACCGCCGATAACAAATGACGAGTCGCCTCGAGATTACTCTCTTAGAGACAATGAAATGCTAGAAGATGCTAGAGTGTCCCAAGAGGCAGAATTGGAATGCTCAGAAGATGTTGAGGATATTGGGGTAGAAGAGAAGTTTCTGAAGCTGAAAAGAGATTTTGAGTGTCAGAGAAAAGAGCTGGCAGTGACTAGGAGGGAGTTGGGGGAGCTCAAGAGGGAGAATCAACAGAAAAGTAGTGAATGTCAAGAAGCTTTGAAGTCCTTAAAGGAGCTTCAGAATGAGCTAATGCGCAAGTCGATGCACGTAGGATCTTTAGCATTTGCTATTGAGGGGCAAGTGAAAGAGAAAAGCAAGTGGTTTATATCACTAAGAGACTTGACGAGGAAATTGAAGATTATGAAAATGGAACACATGAAGCTATTAGAGGAAGCAGAAGCATACAAGAAATATGAAGCAGATATAAGTGAATTGGGACTCATCATCAAGTCTAAAATGAATGAACAACTAGCATCACATGAAGATCTCAAATCCAAATATATTGAAGGGGCTAAGGTTCAAAAAGAGCTTTATAATAAGGTATTGGAGTTGAGAGGAAACATAAGGGTCTTTTGCCGGTGTAGGCCGCTCAATGCCGAAGAGATAAAAGGAGGAGCTGCAATGGCCTTAGATTTTGATTCTGCTAGAGAGGGCGAGCTTACTGTAATGTCAAATGGATCTCCAAAAAAGACTTTTAAGTTTGATGCTGTGTTTGGCCCTCAAGTTGAACAAGCTGATATCTTTGAGGACACTGTACCATTTGCAACCTCGGTTTTAGATGGATACAATGTATGCATTTTTGCATACGGACAGACTGGTACAGGAAAAACCTTCACAATGGAAGGCACAGAAGATGCTCGCGGAGTTAATTTCAGGACTCTCGAGAAAATGTTTGATATTATCAAGGAAAGACAATCCCTCAATCGTTATGATATTTCCGTAAGTGTCTTAGAAGTGTACAATGAACAAATAAGAGATTTGCTGGTTTCAGGAAATCATCCAGGAATGTCTGGAAAAAGATTGGAGATAAGGCAATCTGGTGAAGGAATGCATATTCCGGGGTTGGTCGAGGCACATGTGAACAACATGAATGAAGTGTGGGAAGTCCTACAAACTGGTAGCAATGCAAGGGCTGTAAGCTCAACCAATGCGAACGAGCACAGTAGCCGATCTCACTGCATTCACTGTGTCATGGTTAAGGGAGAAAATCTGTTGAATGGAGAACACACTAGAAGCAAGTTATGGCTTGTGGACTTAGCAGGAAGTGAAAGAGTTGCAAAGACAGAAGTTCAAGGTGATAGATTGAAGGAGACACAAAATATTAATAGATCTCTTTCTGCACTTGGTGATGTCATTTCAGCTCTTGCAACTAAAAGTTCTCACATCCCTTTCAGGAACTCTAAGCTTACACACTTGTTACAAGACTCATTAGGAGGAGACTCAAAGACACTCATGTTTGTACAGATCAGTCCTAATGAAAACGATTTGGGCGAGACAATTTGTTCTCTAAACTTTGCTAGCAGAGTAAGGGGAATAGAATTAGGCCCTCCAAAAAAACAGTGGGATACTATTGAACTTCTGAAACATAAACAGATGGCTGAGAAAACTAAACAAGAGCTAAAGCTGAAGGACTTTCAAATCAAGAAGATGGAGGAAACAATCCATGGCTTCGAGTccaaaatgaaggaaaaagatCATAAAAACAAAGCTCTTCAAGATAAgGTCAAGGAACTGGAATCACAACTTATGATTGAGAGAAAGCTAGCACGTCAACATGTAGACTCAAAGATAGCTGAGCAACATCAAATGAAGCATCAAGAAGAGCAAAACAATCCAATTTGGAGAGCAACACCACTTGCAAATCGACCATTAGCAACTCTCAAGAATTTTAATGATCCAGCTAAACCTTTAACTGAGAACAACATCTTAAAACCTTATAACATACCCTTTTCTACAATAGAAAGCTCCATCGAGTGTATTGATCAcaatgagaaagaaaacaacCCCAACATGGCTGATAACAAATCACTACTTCCAAAAAAGACATCAAGAGCTTCATTATGCTCAATGACACCACGTGGTGTTCCTTCGGCAGCTATTTCAAGGAGAAACTCTTTGATTCCACTCCCAAGCTTAACACATTTTCAATCATCACCATTCGTACCAAAGTTAACAAACCAAGAAGTAAATGAGGAATCAGAAACCTTACAAGAGAGTCCTAAAGAAGTTAAAAGTGGTGTTAAGAAGATAGGTAGCATACTAAGAAGAAGCATACATAAGAAAGGTCAAGTGAGGTCTCCATTACAACAACACATGAGAAAAGTTGGTGGTGTAAATGTGAGAGTTTCTATTGGAAGTAGAGGGAAATTGGCACAAAGAGGGGTGCAAGTTGGAAATGGGAGAAGAGGTGGGGGTGCTAAAGAGATTCAACAGAAGAATAGTCATAAGGACAAGGAAAGGGCATGGATATAA 3033 0.3904 MEDNEWNHYDPLLLTDVSFQQQQTISTSVSQLSLSSLNSAMEADSQSCGGNPSYGLSPENESFERNSLQFDDPIVKNLVDGRSILGYSMNSPDLVICGGSPDIAGMTYCDSPEISKSKNCFNASMELSLENGINASEVEVCNVHKTPTVKFSNLCQTIEPEEELISPEASFELHPPPITNDESPRDYSLRDNEMLEDARVSQEAELECSEDVEDIGVEEKFLKLKRDFECQRKELAVTRRELGELKRENQQKSSECQEALKSLKELQNELMRKSMHVGSLAFAIEGQVKEKSKWFISLRDLTRKLKIMKMEHMKLLEEAEAYKKYEADISELGLIIKSKMNEQLASHEDLKSKYIEGAKVQKELYNKVLELRGNIRVFCRCRPLNAEEIKGGAAMALDFDSAREGELTVMSNGSPKKTFKFDAVFGPQVEQADIFEDTVPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEDARGVNFRTLEKMFDIIKERQSLNRYDISVSVLEVYNEQIRDLLVSGNHPGMSGKRLEIRQSGEGMHIPGLVEAHVNNMNEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGEHTRSKLWLVDLAGSERVAKTEVQGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKTLMFVQISPNENDLGETICSLNFASRVRGIELGPPKKQWDTIELLKHKQMAEKTKQELKLKDFQIKKMEETIHGFESKMKEKDHKNKALQDKVKELESQLMIERKLARQHVDSKIAEQHQMKHQEEQNNPIWRATPLANRPLATLKNFNDPAKPLTENNILKPYNIPFSTIESSIECIDHNEKENNPNMADNKSLLPKKTSRASLCSMTPRGVPSAAISRRNSLIPLPSLTHFQSSPFVPKLTNQEVNEESETLQESPKEVKSGVKKIGSILRRSIHKKGQVRSPLQQHMRKVGGVNVRVSIGSRGKLAQRGVQVGNGRRGGGAKEIQQKNSHKDKERAWI 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03988 1010 PRINTS Kinesin heavy chain signature 569 586 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g03988 1010 PRINTS Kinesin heavy chain signature 600 618 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g03988 1010 PRINTS Kinesin heavy chain signature 649 670 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g03988 1010 PRINTS Kinesin heavy chain signature 448 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g03988 1010 MobiDBLite consensus disorder prediction 995 1010 - -
Tsu02g03988 1010 SMART kinesin_4 372 707 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g03988 1010 ProSiteProfiles Kinesin motor domain profile. 374 699 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g03988 1010 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 737 IPR027417 -
Tsu02g03988 1010 CDD KISc_C_terminal 372 701 - -
Tsu02g03988 1010 Pfam Kinesin motor domain 380 699 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g03988 1010 Coils Coil 298 318 - -
Tsu02g03988 1010 PANTHER KINESIN-LIKE PROTEIN KLP-3 208 995 - -
Tsu02g03988 1010 Coils Coil 228 276 - -
Tsu02g03988 1010 Gene3D Kinesin motor domain 369 743 IPR036961 -
Tsu02g03988 1010 MobiDBLite consensus disorder prediction 976 1010 - -
Tsu02g03988 1010 ProSitePatterns Kinesin motor domain signature. 599 610 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu02g03988 1010 Coils Coil 720 775 - -
Tsu02g03988 1010 MobiDBLite consensus disorder prediction 43 62 - -
Tsu02g03988 1010 PANTHER KINESIN-LIKE PROTEIN KIN-14Q 208 995 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03988 Tsu-Chr2 46334276 46339461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03988 316 726 Calmodulin-binding Proteins AT5G65930 39.430 2.10e-78 278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03988 02 46334276 46339461 Tsu02g03988 02 46334276 46339461 ECH