Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03874 ATGAAAGATGGTGGGAGAAAACAAGGTGCAATGTCACCATGTGCTGCATGCAAGCTTCTAAGAAGGAGATGTTCTAAAGATTGTGTGTTTGCTCCATATTTTCCAGCTGATGAACCTCACAAGTTTGGTAATGTCCACAAGGTTTTTGGAGCTAGCAATGTGAACAAAATGTTACAGGAATTGCCAGAACATCAACGAAGTGATGCAGTTAGTTCAATGGTATATGAAGCAAATGCAAGAGTAAGGGACCCTGTTTATGGATGTGTAGGAGCAATATCCTCTCTACAACAACAAGTTGATGTTCTTCAAACTCAATTAGCACAATCACAAGCAGAGGTTGTGCACATGAAAATGCACCAATTCTCATCACCAAATCAGCACCAACCATCATATTTTACTACTCCTACAGCCTCCAATTCATCACCACCTTCAGAAAATGTGTACCAATCAAGCAAGCTTGTTTCTTCACACATCAACATTGACCAATCCTTGTGGTCATACTAG 504 0.4028 MKDGGRKQGAMSPCAACKLLRRRCSKDCVFAPYFPADEPHKFGNVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLAQSQAEVVHMKMHQFSSPNQHQPSYFTTPTASNSSPPSENVYQSSKLVSSHINIDQSLWSY 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03874 167 Coils Coil 92 112 - -
Tsu02g03874 167 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Tsu02g03874 167 MobiDBLite consensus disorder prediction 122 148 - -
Tsu02g03874 167 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 147 - -
Tsu02g03874 167 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Tsu02g03874 167 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03874 Tsu-Chr2 44760898 44767415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03874 1 120 AS2 family AT1G31320 83.333 2.31e-67 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tsu02g03874 LOB 2.3e-43 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03874 02 44760898 44767415 Tsu02g03874 02 44760898 44767415 ECH