Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03868 ATGCCCCTATCTCCTTCTTCCATGGCTTCTTCAATTCCTCATCACTATTATTCAAACTATACTTCTGATCATTTCACCACACAACAACAAGGTTTATCTTCacataataataacattattaATACCTCAATTTTAGACAATACTATGATGTGGGGTTGTCAAGAAAATTTAATGCCTGTTTTTGATAATTATGGAGCATTTGATCAAATTGTGTCACTTGATTGTGATACTATGTCTTCTTCTGGGGCTTGGATTCATCCAAATTTTGTCGAGCAACAAGATTTCGCCGTTCCGGCTTTGTTATCGGATTGTAAAATGGGATTTTATGGTGGAGGGATTCAGAATTTTAATGGAAGATATAATAATCAACCACATATTGGTCATGAGTTTGTAGAAGATCAATGTTGTGGTTTTGTTGAAGATATTAAACCACCTCCATCTTATCCTaatgctgcaagagaaaattgGGGGATACAAGGTAATCAAATAACAGCAATTGAAGAACCAAACATAAAGGTAGGAAGGTACTCAGaagaggaaagaaaagaaagaattcttcgatatttgaagaaaagaaaccaAAGAAATTTCAACAAAACCATCAagTATGCATGTCGGAAAACTTTAGCTGATAgaagagtgagagtgagaggaAGGTTTGCAAGAAACAATGAGATATGTGAAGAAGATCACATGGCCACAAAAAAGCTTGAGAATCATCATGATGATCACATCAATGATGACTTTTATGGTTCTGATTCATTCCAGTTCCAGTTAAAGAATGAGGAGGAGGACTGGCTTCAAGAGGCTATGGCAAGTTTGGTGTATTTATCTCATTCATCACCGGATGATATATGA 858 0.3159 MPLSPSSMASSIPHHYYSNYTSDHFTTQQQGLSSHNNNIINTSILDNTMMWGCQENLMPVFDNYGAFDQIVSLDCDTMSSSGAWIHPNFVEQQDFAVPALLSDCKMGFYGGGIQNFNGRYNNQPHIGHEFVEDQCCGFVEDIKPPPSYPNAARENWGIQGNQITAIEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNEICEEDHMATKKLENHHDDHINDDFYGSDSFQFQLKNEEEDWLQEAMASLVYLSHSSPDDI 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03868 285 Pfam CCT motif 181 223 IPR010402 GO:0005515
Tsu02g03868 285 ProSiteProfiles CCT domain profile. 181 223 IPR010402 GO:0005515
Tsu02g03868 285 PANTHER ACTIVATOR OF SPOMIN::LUC2 8 280 - -
Tsu02g03868 285 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03868 Tsu-Chr2 44677599 44679769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03868 177 233 C2C2-CO-like Transcription Factor Family AT5G15850 45.614 7.60e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu02g03868 CCT 9e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03868 02 44677599 44679769 Tsu02g03868 02 44677599 44679769 ECH