Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03750 ATGACGACGGTGGCACTGATGTTCGGTGGCAGAATAACCACGGCACTCCGATCATCCAACCTTATCTATCGTTCTTCCTCTTCCCATCTTCTTTCAACTAACTTCCTCATGCAAATTCCCCTCACTCGCAAGATGACCACGAATGCACATAGTATTGCCTCCCAGCTTAACAGTTCAGGGCTGTTGAGGACTCAGGGCCTCATTGGAGGGAAATGGCAGGATGCTTATGATGGGAAAACCATAAAGGTTTATAATCCAGCAACTGGCGAATCTATAACAGATGTAGCATGCATGGGTGGAAGGGAAACAAATGATGCAATTTCCTCTGCTTTTGATGCATTTAAATCATGGAGCAAAACCACTGCTGCTGAGCGAAGTAAACTTCTGAGGAAATGGTATGATTTGCTAATGGCACACAAAGAAGAGTTAGCACAACTTATAACCTTGGAGCAAGGAAAGCCTCTTAAAGAGTCTCTGGGTGAGATAAATTACAGTGCTGGCTTCATTGAGTTTGCATCGGAGGAGGCAAAACGTATATATGGGGATATAATTCCTGCACCTCTCTCTGATCGGCGGTTATTTGTTTTAAAGCAGCCTGTAGGGGTTGTAGGTGCAATTACACCTTGGAACTTTCCCCTTGCCATGATTACCCGAAAGGTTGGTCCAGCTCTTGCATGTGGATGTACAGTGGTTATAAAGCCCTCTGAACTTACACCACTGACGGCTTTAGCTGCAGCTGAACTCTCTATTCAAGCTGGAATTCCTGCGGGTGTTGTAAACGTGGTTATGGGAAATGCTCCTGATATTGGAGACGCTTTAATCGCAAGCCCACAGGTAAGGAAGATTACATTCACTGGCTCGACGGCTGTCGGAAAGAAATTGATGGCAGGTTCTGCTGAGACGGTTAAAAAAGTATCTCTGGAACTTGGTGGCAATGCGCCTTGCATAGTTTTTGATGATGCTGACCTGGATGTTGCAGTGAAAGGAACACTTGCAGCAAAGTTCCGTAATAGCGGACAAACTTGTGTCTGTGCAAATAGAATTCTTGTGCAAGAAGGTATATATGACAAATTTGCAAATGCATTGCTTGATGCTGTACAAAGTATGAAAGTTGGAGATGGTTTTAGTGAAGGTGTGGCTCAGGGCCCTCTGATCAATGAAGCTGCTGTCAAAAAGGTTGACTCCTTGATTCAGGATGCTACGTCAAAGGGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATCAACCTTTTATGAACCAACAGTCATCACTGATGTCGACAATGACATGCTTATATCAAGACAGGAAGCATTTGGACCAGTCGCACCCCTTCTGAGATTCAAAACTGAAGAGGATGCTATCAGAATTGCTAATGACACTAATGCAGGCTTGGGTTCATATGTATTCACAAACAGTATCCCACGATCATGGCGTGTGGCCGAGGCTCTTGAATATGGACTTGTAGGTGTTAATGAAGGAGTAATTTCAACAGAGGTGGCTCCATTTGGTGGAGTTAAACAGTCTGGCCTCGGAAGAGAAGGTTCTAAATATGGGATGGATGAATATTTGGAGATCAAGTATGTCTGCTTGGGAAACATGAACAAAGATTGA 1620 0.442 MTTVALMFGGRITTALRSSNLIYRSSSSHLLSTNFLMQIPLTRKMTTNAHSIASQLNSSGLLRTQGLIGGKWQDAYDGKTIKVYNPATGESITDVACMGGRETNDAISSAFDAFKSWSKTTAAERSKLLRKWYDLLMAHKEELAQLITLEQGKPLKESLGEINYSAGFIEFASEEAKRIYGDIIPAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPDIGDALIASPQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRILVQEGIYDKFANALLDAVQSMKVGDGFSEGVAQGPLINEAAVKKVDSLIQDATSKGAKVILGGKRHSLGSTFYEPTVITDVDNDMLISRQEAFGPVAPLLRFKTEEDAIRIANDTNAGLGSYVFTNSIPRSWRVAEALEYGLVGVNEGVISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGNMNKD 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03750 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 311 500 IPR016163 GO:0016620
Tsu02g03750 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 335 346 IPR016160 GO:0016491
Tsu02g03750 539 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 59 536 - -
Tsu02g03750 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 78 525 IPR016162 GO:0016491
Tsu02g03750 539 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 83 529 IPR010102 GO:0009013|GO:0009450
Tsu02g03750 539 SUPERFAMILY ALDH-like 56 537 IPR016161 GO:0016491
Tsu02g03750 539 CDD ALDH_F5_SSADH_GabD 83 533 - -
Tsu02g03750 539 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 307 314 IPR029510 GO:0016491
Tsu02g03750 539 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 59 536 - -
Tsu02g03750 539 Pfam Aldehyde dehydrogenase family 72 531 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03750 Tsu-Chr2 42483540 42494914 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03750 02 42483540 42494914 Tsu02g03750 02 42483540 42494914 ECH