Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03338 ATGGACATTATTATCCTCCTCTTTCTTATCTTTCTCTCATCTCTCCTCTCATATCCAttcataatcaaacacaataaaTTACATGAAACCATAGGCAAACCTAAACTTCCACCAGGTTCAATGGGTTGGCCTTATATTGGAGAAACTTTTCAACTCTACTCTCAACACCCCAACATCTTCTTTGCTTCTAAACAAAAAAGATATGGAGAAATATTTAAAACACATATACTAGGATGTCCATGTGTGATGTTAGCAAGTCCTGAGGCTGCAAGATTTGTGTTGGTGACTCATTCTCATTTGTTCAAGCCTACATATCCCAAAAGCAAAGAGAAACTTATTGGTTCTTCAGCATTGTTCTTTCATCAAGGACATTACCATACTCGTATTAGGAAACTCGTTCAAACCTCGCTTTCTCCTGAATCAATCAAGAAATTGATCCCTGGTATTGAAAACGAGGTCATTTCCTCCTTGGAATCGTGGGTTTCTATTGGACAAGTCGTTAACGCTTTCCATGAAATGAAAAAGTTCTCTTTCAATATTGGCATTCTCTCTATCTTTGGTAACTTGGAAAGCAATTATAGAGAACAACTTAAGGAAAATTACTGCATAGTAGAGAAAGGCTacaattcttttccaaataggATACCCGGAACTTCATACTCCAAAGCTGTTTTGGCGAGGCAGAGAATTCAAGAGATTATAAGTGAAATAATTTGCAAGAGAAAGGAGCAAAGATCAATTGAGAAGGATCTATTAGGCCACTTGCTAAACTACAAGAATGAAAAAGGTGAAATGTTAAGTGATGAGGAAATAGCAGATAATGTAATTGGAGTACTATTTGCAGCTCAAGATACTACAGCAAGTGTTTTGACTTGGATTCTCAAGTACCTTCATGATGACCAGAAACTTCTTGAAGCAATTAAAGCAGAACAAATGACAGtatataaaaacaatgatgGAGGGAAAATTCCATTGACATGGTGTCAGATAAAAAATATGCCACTTACTCATAGGGTGATATTGGAAAGTTTAAGGATGGCAAGTATTATATCATTTACTTTTAGAGAAGCTGTAGTTGATGTGGTATATAAAGGATATTTAATACCAAAGGGTTGGAAAGTAATGCCACTATTCAGAAACATCCATCATAATCCAGAATTCTACCCTGCTCCTCACAACTTTGATCCATCAAGGTTTGAGTTTACTCCAAAGCCCAATACATTTATGCCATTTGGCAATGGAGTGCACTCTTGCCCAGGAAATGAGCTAGCCAAATTGAATATGTTGATATTAATTCACCATTTAGTAACCAAATTTagGTGGGAGGTAGTGGAAAATCAGAGTGGAGTCCAATATAGCCCATTCCCAATCCCTCTGCAAGGTCTACCCACAAGATTTTGCAGAATCAAATAG 1413 0.3567 MDIIILLFLIFLSSLLSYPFIIKHNKLHETIGKPKLPPGSMGWPYIGETFQLYSQHPNIFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTHSHLFKPTYPKSKEKLIGSSALFFHQGHYHTRIRKLVQTSLSPESIKKLIPGIENEVISSLESWVSIGQVVNAFHEMKKFSFNIGILSIFGNLESNYREQLKENYCIVEKGYNSFPNRIPGTSYSKAVLARQRIQEIISEIICKRKEQRSIEKDLLGHLLNYKNEKGEMLSDEEIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMTVYKNNDGGKIPLTWCQIKNMPLTHRVILESLRMASIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFYPAPHNFDPSRFEFTPKPNTFMPFGNGVHSCPGNELAKLNMLILIHHLVTKFRWEVVENQSGVQYSPFPIPLQGLPTRFCRIK 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03338 470 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 7 467 - -
Tsu02g03338 470 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03338 470 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03338 470 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03338 470 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03338 470 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03338 470 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03338 470 PANTHER CYTOCHROME P450 26 7 467 - -
Tsu02g03338 470 Pfam Cytochrome P450 37 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03338 470 Gene3D Cytochrome P450 27 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03338 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Tsu02g03338 470 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03338 470 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03338 470 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03338 470 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03338 470 SUPERFAMILY Cytochrome P450 33 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03338 Tsu-Chr2 37359585 37362776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03338 2 468 Cytochrome P450 AT3G19270 69.165 0.0 683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03338 02 37359585 37362776 Tsu02g03338 02 37359585 37362776 ECH
Tsu01g00410 01 3399715 3403435 Tsu02g03338 02 37359585 37362776 ECH