Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03309 ATGCAAGGTCAAAGGAGGACTATTGGGTCCTTCCCGGCAATTGTTAGCATGATGCAAGGGCCTAGTTCGAGTGGCACCGATACAAATCGTCAGTCTTCCTTGAATCATGTGCAAAATTCAGTTGATTTCCGGTTGTCAGATTATAGGGGGTCTTCTGGTGAGACTGCGTGTTTACGTGGTACTGGTCCAAATGTGAGCTTTAGTGGCTGGAATACTGGTGAACCCAATTCTGGACTGAATCCGATCAACCAAGTTGAAGACGAAGGTTTAAAATTAGAACATAGGTTGTCTTCTTCTTCATACAGTGCTACTTCTGAGGATGATGTGAGAACTGAGGAAGGGCAATTACTTGGGAACCAATCCAGAAACCACCCTTCCTTTTTGCAAGGTTCCAGCTCCAATCATACAGCCCAGAGTATTAATCTCAGTATGGGGCACATTTCGAACTCTTCTGATCGCGGTAAAGGAAAAGAATCTAGTAGTGGTGTTAATAACCACAATCCTTGTGAATTAGATATAGAGAACACATCACTTGGCAGTTCTTCATTTAATCATATAGGAGCACCGTCTGCAAGCTCTGGATACATGGCTTGGGGAGATAGTGGTAGTTCAAGTTCTTCTTTAGCTAATTGGGGTCCTTCTTGCAAGAGAAAAACCCTTGAAGGAAGTTCTATGCAACTGTGTACTGAAGGAAGCTCGAGTTCCCTTGTGCAATCTGGAAATGGTTACTGGCTTACTGATTCTGTTGATCTTAATGCTCCTGGAAGCTTAGGTGATTTGTCACCTTTAGAGGATTTTCGTGTTACTAGTCCTCCATTTCAGCAGAGTACAAGAAATGAAGTGAGACAAGAAGCTTCAAATATGTTTCCTTCTATGATAAGTATTGGGGAAAATGTGGAAAGGCCTCTAAGAAACTTTGATAGGAGAATAACCCATCTACAGCATCCGGAATCTGTACCTCTCAATTTAACATCATCAGGGAGTACTAGACATCATAATCACCCTTCTCCGCATCAAATACCCGGCTCTTTCTCATTTAACGAGTCCTTGGATTTGAGGTTAACAGCTGGAGCAACAGCTGCCAATTCTGCTGTTCCTCAAAATCAGTCACCTGCCCTGCACATGCATCCTTTTCCGTGGAATAGAGCTGCTAATCCTAGAGTGTCCAGATCTTCAAATTCTTATAACTCGGGAGAAAGAGCAGTACGTgaagattttaattttagaatctTCCCAAGAGATAGTACCGAGCATCCCATGAACGTGCCTGCATCTTCAGGACATGAACCTACAGGTTGGTATTCATCTTCCAGTAATGTGAACAATGCTGGAGGTATGCCTCCTCCATCCTGGATTGGATCTAGTTCAAATGTCCACTCATTACCTAATCCTGGCTGGACTTTTAACCATGAAGTCCCAACTGAAAATCTACAGAGAGTTTCAGAGTTCAGTCCTTGGTCCCTTTTTCCTTCAATCAGTTCAGCATCTGGTACTCATAATAGCCATTCCTCCTCTACTTCCGGCCCTCCTTCATTTTCTCAGGGTTCTAGCAGCAATCAACCATATCCAAGAACATCATATTTGACGGAAAGAAGGGGCAGTGATGTTCTCTCTGCTCCTCATTCACTGCGAACATTACCCTCTGACAACGAGGGGAGACGCCGGCTTATATCTGAGATTCGTCAAGTCCTGATTGCAATGCGGAGGGGTGAGAACTTGCGTGCTGAGGTTCGAACTTTAGTGTATAATTATATCTCTTGA 1761 0.4327 MQGQRRTIGSFPAIVSMMQGPSSSGTDTNRQSSLNHVQNSVDFRLSDYRGSSGETACLRGTGPNVSFSGWNTGEPNSGLNPINQVEDEGLKLEHRLSSSSYSATSEDDVRTEEGQLLGNQSRNHPSFLQGSSSNHTAQSINLSMGHISNSSDRGKGKESSSGVNNHNPCELDIENTSLGSSSFNHIGAPSASSGYMAWGDSGSSSSSLANWGPSCKRKTLEGSSMQLCTEGSSSSLVQSGNGYWLTDSVDLNAPGSLGDLSPLEDFRVTSPPFQQSTRNEVRQEASNMFPSMISIGENVERPLRNFDRRITHLQHPESVPLNLTSSGSTRHHNHPSPHQIPGSFSFNESLDLRLTAGATAANSAVPQNQSPALHMHPFPWNRAANPRVSRSSNSYNSGERAVREDFNFRIFPRDSTEHPMNVPASSGHEPTGWYSSSSNVNNAGGMPPPSWIGSSSNVHSLPNPGWTFNHEVPTENLQRVSEFSPWSLFPSISSASGTHNSHSSSTSGPPSFSQGSSSNQPYPRTSYLTERRGSDVLSAPHSLRTLPSDNEGRRRLISEIRQVLIAMRRGENLRAEVRTLVYNYIS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03309 586 MobiDBLite consensus disorder prediction 417 456 - -
Tsu02g03309 586 MobiDBLite consensus disorder prediction 317 345 - -
Tsu02g03309 586 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 2 570 - -
Tsu02g03309 586 MobiDBLite consensus disorder prediction 385 399 - -
Tsu02g03309 586 MobiDBLite consensus disorder prediction 428 456 - -
Tsu02g03309 586 MobiDBLite consensus disorder prediction 494 526 - -
Tsu02g03309 586 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 2 570 IPR045191 GO:0061630
Tsu02g03309 586 MobiDBLite consensus disorder prediction 363 399 - -
Tsu02g03309 586 MobiDBLite consensus disorder prediction 145 172 - -
Tsu02g03309 586 MobiDBLite consensus disorder prediction 314 345 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03309 1 576 C3H Transcription Factor Family AT2G15530 30.308 8.39e-33 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03309 02 37037878 37042802 Tsu02g03309 02 37037878 37042802 ECH
Tsu01g00419 01 3485046 3491769 Tsu02g03309 02 37037878 37042802 ECH