Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00789 ATGGTGAAAATCACCGAAGAAATTGACCACTTTCATCAACAAGAAGAAGAGGAATTGGAAGAAGTTATAGACTATGATGACCTGAAGAAACGCATGTGGAAGGACAGAATCCTGCTACAGAAGCTCAAGGAGAAAGGTATAAAAGATgatcaacaaaatcaacaagcAAAAGATGAGGCATCAAGAAGGAAAAAGATGTCAAGAGCACAAGATTCAATCCTTAAATACATGATGAAGATTATGACAACATGCAAAGCTCAAGGTTTTGTCTATGGTATTATACCAGAAAAAGGAAAACCAGTAACAGGTTCTTCTGAAAGCTTGCGTGAATGGTGGAAAGAACAAGTCAAATTCAGTCAAAATGCTCCATTAGAAGTTTCTAAATATTTACCACTCTTTGAAAAAGATCATGAAGAGTTGGAATTATTAGATCCAATTTCATCATATTTGTATTTACTTTATGATTTGCAAGATACTACTTTAGGTTCTCTTCTTTCAGCTCTAATGCAACACTGTGCACCACCACAAAGAAGATTCCCTCTTGAAAGAGGTTTAGCTCCTCCTTGGTGGCCTAATGGAACAGAACAATGGTGGGGTCAACAAGGTCTTTTGGCACAAAAACAAGGTCCACCACCTTATAAAAAACCACATGATTTGAAAAAGGCTTGGAAAGTTTCTGTGTTGGCTGCAATCATTAAGCACTTGTCTCCTGATGTTGATAAAGTTAGAAGGTTGGTGACTCAATCAAAGACTTTGCAAGATAAGATGACGGCTAAAGATAGTGCAACTTGGTCCAAAGTTATGAACCAAGAACAGGCTTTGGTTCATCTTACTGAAAATTGCCTCAAGATATCAGAAGAAGGTGAAAGTTCTAGCACTACTAAACATGTTTTGAATCAGTTGGAAGAATGTGGTAGCAGTGAGAAGAGGAGgaagtttgattttgattttgatgttgatgttgatattGATAAGCTACTTTCATGGCAATATGCTGAGTGTCCACAAAGTGAATTAGGTATGGGATTTTCAGACAAAAGCTCAAGAGTGAATCATGAATCACTCTGTTCTTACAGAACAGAACAAGGAAATGTTCCCTTCCATGATTGGTTGAATATGGGTATAGCAGGGGCTAGTAATCAGAATCAGGATCATAATAACCTAGTTGAGAATGTGAATGAGCTGAGAGAGATTGTGGATAGGACAGTAGAAGAAGATTATGGTGGCTTCTGGTTAAATAGCGTGCAAGATCTTGAATTGCACGCGGGAGTGGACATGGAAAGAGATAACGTGGACTTGAATCAAAATCCAGCACAAGTGACAACACTGAGTCATGAAGAAACCTCGATATGGGACTTGACATACAACTAA 1371 0.3683 MVKITEEIDHFHQQEEEELEEVIDYDDLKKRMWKDRILLQKLKEKGIKDDQQNQQAKDEASRRKKMSRAQDSILKYMMKIMTTCKAQGFVYGIIPEKGKPVTGSSESLREWWKEQVKFSQNAPLEVSKYLPLFEKDHEELELLDPISSYLYLLYDLQDTTLGSLLSALMQHCAPPQRRFPLERGLAPPWWPNGTEQWWGQQGLLAQKQGPPPYKKPHDLKKAWKVSVLAAIIKHLSPDVDKVRRLVTQSKTLQDKMTAKDSATWSKVMNQEQALVHLTENCLKISEEGESSSTTKHVLNQLEECGSSEKRRKFDFDFDVDVDIDKLLSWQYAECPQSELGMGFSDKSSRVNHESLCSYRTEQGNVPFHDWLNMGIAGASNQNQDHNNLVENVNELREIVDRTVEEDYGGFWLNSVQDLELHAGVDMERDNVDLNQNPAQVTTLSHEETSIWDLTYN 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00789 456 Coils Coil 375 405 - -
Tsu02g00789 456 Pfam Ethylene insensitive 3 26 271 IPR006957 GO:0005634
Tsu02g00789 456 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 10 455 IPR006957 GO:0005634
Tsu02g00789 456 SUPERFAMILY DNA-binding domain of EIN3-like 151 275 IPR023278 GO:0003700|GO:0005634
Tsu02g00789 456 PANTHER ETHYLENE INSENSITIVE PROTEIN 10 455 - -
Tsu02g00789 456 Gene3D - 144 281 IPR023278 GO:0003700|GO:0005634
Tsu02g00789 456 Gene3D - 55 138 IPR023278 GO:0003700|GO:0005634
Tsu02g00789 456 MobiDBLite consensus disorder prediction 48 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00789 Tsu-Chr2 6583830 6585200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00789 1 453 EIL Transcription Factor Family AT5G10120 45.030 1.49e-126 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Tsu02g00789 EIN3 4.1e-110 No_clan