Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00144 ATGAGAACCCAACGCTCTCACCATTTCCTTCTATTATCCATCCTCTTCTTCGCATCAACATTCTCATATCTCCGATTAGTAACCGCCACCGGAGCAGAACCTCCGATCACCGGAAACAACGACGACACCGAATACATCCGTTCAAGTTGCAACACAACACTATACCCTGACATATGCTACACTTCTCTCTCTCGTTACGCCAATGCAGTTCAACAAAATCCAGGCCAACTCGCTCGTATCGCCATAGCCGTAAGTTTCTCCAAAGTTCACCGTACCGCATCATACCTCTCAAATCTCACTCGCGTTGCCGATTACAGCGGTAACTCACGCGCCGCACTCGCTCTCCATGACTGTTTCTCGAATCTCGATGACGCCGTTGATGAAATCCGTGGTTCGATTAAACAGATGCGTCAGTTAGGAGCCGCCGGAAGTGGAACTGATTCGTTTCTTTTTCAGATGAGTAACGTTCAGACGTGGATGAGTGCTGCGCTTACAGATGAAGAAACGTGTACGGATGGATTTCAAGATGTGGAAGATTGTCCGATGAAATCGGATGTAGAGAATCGTGTGACGAAGGTTAAGAAGTTCACGAGTAATGCTTTGGCACTTGTTAATGGTTACGCCAAAAAAGGAATGCCGTGA 642 0.472 MRTQRSHHFLLLSILFFASTFSYLRLVTATGAEPPITGNNDDTEYIRSSCNTTLYPDICYTSLSRYANAVQQNPGQLARIAIAVSFSKVHRTASYLSNLTRVADYSGNSRAALALHDCFSNLDDAVDEIRGSIKQMRQLGAAGSGTDSFLFQMSNVQTWMSAALTDEETCTDGFQDVEDCPMKSDVENRVTKVKKFTSNALALVNGYAKKGMP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00144 213 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 207 IPR006501 GO:0004857
Tsu02g00144 213 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 10 210 - -
Tsu02g00144 213 Pfam Plant invertase/pectin methylesterase inhibitor 45 203 IPR006501 GO:0004857
Tsu02g00144 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 210 - -
Tsu02g00144 213 SMART PMEI_2 41 203 IPR006501 GO:0004857
Tsu02g00144 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 207 IPR035513 -
Tsu02g00144 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 205 IPR035513 -
Tsu02g00144 213 CDD PMEI-like_3 48 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00144 Tsu-Chr2 1063688 1064647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00144 10 213 Carbohydrate Esterase AT5G53370 27.885 1.29e-16 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00144 02 1063688 1064647 Tsu02g00144 02 1063688 1064647 ECH