Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00021 ATGGAAGGCCTTCTCGGACTTCTAAGGATTCACATCAAGCGTGGCGTGAACCTCGCCGTTCGTGATGTCAATACCAGTGATCCATATGTGGTCGTCAAGATGGGGCACCAGAAACTGAAGACTCGTGTCATTAAAAAGGATATCAATCCTGAATGGAATGAAGACCTTACACTTTCAGTAACAGAACCCGTTCTTCCATTCATGCTGACTGTGTATGATCATGACACATTTAGCGCAGATGACAAAATGGGAGATGCTGAATTCGACCTCACACCATATGTAGAGGCCTTAAAGATGAACATAGATGGCATCCCCAGTGGTACTATAATCACCAGAATACAACCGTGCAGGACTAATTGCTTAGCGGAGGAGAGTTGCATCACTTACACCGATGGCAAAATTATCCAAGATGCTGTTCTTAGATTGCGACACGTTGAATGTGGTGAAGTCGAAATTCAATTGGAATGGATCAATCTTCCTGGTGCTCATGGTTTCTAA 498 0.4398 MEGLLGLLRIHIKRGVNLAVRDVNTSDPYVVVKMGHQKLKTRVIKKDINPEWNEDLTLSVTEPVLPFMLTVYDHDTFSADDKMGDAEFDLTPYVEALKMNIDGIPSGTIITRIQPCRTNCLAEESCITYTDGKIIQDAVLRLRHVECGEVEIQLEWINLPGAHGF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00021 165 CDD C2_ArfGAP 5 148 - -
Tsu02g00021 165 Gene3D C2 domain 5 163 IPR035892 -
Tsu02g00021 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 111 IPR035892 -
Tsu02g00021 165 Pfam C2 domain 6 92 IPR000008 -
Tsu02g00021 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Tsu02g00021 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 1 163 - -
Tsu02g00021 165 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Tsu02g00021 165 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00021 Tsu-Chr2 138106 139051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00021 38 165 C2H2 Transcription Factor Family AT1G70790 57.692 1.73e-50 157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00021 02 138106 139051 Tsu06g03731 06 49381196 49384227 PCT