Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04934 atggCAAGCCACGGCTCATCATTTTCGAGCCTCCGAACCTATCTCCAAGCCGTCGCTAACACTCCTTCTCGCTTCGCTCGTCGCGGCTTCTCCGTCTCAACTTCTTATGAAGAAATGAGCCGCGTTCGAGCCAGGTCCGGTACCAGCATGCGGAAGACACTCCGCTGGTTCGACCTTGTCGGCTTTGGTATCGGCGGAATGGTCGGCGCCGGAGTTTTCGTCACCACCGGTCACGCTAGTCGCGTTTACGCCGGTCCTGCTGTTGTTTTATCTTACGCCATTGCTGGTTTCTGCGCTCTCTTATCAGCTTTCTGTTACACTGAGTTCGCCGTTGATATGCCTGTCGCCGGCGGTGCTTTTAGCTACCTTCGCGTCACCTTCGGTGAATTTGCTGCGTTTATAACCGGCGCAAATCTGATCATGGATTACGTGATGTCCAATGCCGCCGTTGCTAGAGGTTTTACGGCCTATTTCGGCACCACAATCGGTATCTCCTCCGATAAATGGAGGATCACCGTTCCTTCATTTCCGAAAGGATTTAATCAAATAGATATGGTCGCTGTTGTAGTCGTTTTACTCATCACCATCGTTATCTGCTACAGTACGAGGGAAAGTTCAGTGGTGAATATGATATTGACGGCGTTGCACATATTGTTCATAGCATTTGTGATAGTGATAGGTTTTTGGAAAGGTAGTTGGAAGAATTTTACACACTCGTCGAATTCGGAGCATCCGTCGGGGTTTTTTCCATTTGGTGCTGCTGGTGTGTTTAATGGTGCAGCAGCGGTTTATTTAAGCTATATTGGTTATGATGCTGTTTCAACAATGGCGGAAGAAGTGAAGGAACCTGTTAAAGATATTCCTATAGGTGTTTCTGGATCTGTAATTATCGTTACAATTCTTTATTGTCTCATGGCAGCTTCAATGTGCATGCTTCTCCCTTACGACATGATTGATCCTGAGGCACCGTTTTCAGCAGCTTTTAAATCGGACGGCTGGGGATGGGCGTCAAGAGTGATAGGAGTGGGGGCCAGTTTTGGAATATTGACATCATTGATAGTGGCTATGTTGGGTCAGGCTCGTTATATGTGTGTTATTGGACGTTCTAATGTGGTCCCTGCTTGGTTTGCTAAGGTCCACCCAAAGACCTCAACTCCTGTCAACGCCTCTGCTTTTCTTGGGATATTCACAGCAGCAATTGCACTTTTCACTGATCTTGATGTTCTGCTTAATCTTGTGTCAATTGGTACACTCTTTGTTTTTTACATGGTGGCAAATGCTGTGGTCTATCGACGTTATGTAGCTGCAGGAACAACAAATCCATGGCCAACAGTGTCTTTTCTCTTGTCATTTTCATTCACTTCAATCATGTTTACCCTCATTTGGAAATGTGTACCATCAGGGGTAGCAAAAGCTGGGATGTTAAGTGCTTGTGGTGTGGTTGCTATAGCAATATTGCAACTTTTTCATTTCACTGTCCCTCAAGCTAGAAAGCCAGAATTTTGGGGTGTACCACTTATGCCATGGATACCAGctacatcaatttttttgaatttgtttttgctTGGATCACTTGATGGGCCATCTTATGTTAGATTTGGAGTCTTTTCTGTTGTTGCAGTGCTCTTTTATGTGCTCTATAGTGTTCATGCTAGCTATGATGCTGAAGGAGACGGTTCTCTTAGTCAAAAGAATGTTGAAGTCCATACGGAGTCAAAAGAAAGTGTGGACCAAAGTTTCAAAGTGTAG 1749 0.4465 MASHGSSFSSLRTYLQAVANTPSRFARRGFSVSTSYEEMSRVRARSGTSMRKTLRWFDLVGFGIGGMVGAGVFVTTGHASRVYAGPAVVLSYAIAGFCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFITGANLIMDYVMSNAAVARGFTAYFGTTIGISSDKWRITVPSFPKGFNQIDMVAVVVVLLITIVICYSTRESSVVNMILTALHILFIAFVIVIGFWKGSWKNFTHSSNSEHPSGFFPFGAAGVFNGAAAVYLSYIGYDAVSTMAEEVKEPVKDIPIGVSGSVIIVTILYCLMAASMCMLLPYDMIDPEAPFSAAFKSDGWGWASRVIGVGASFGILTSLIVAMLGQARYMCVIGRSNVVPAWFAKVHPKTSTPVNASAFLGIFTAAIALFTDLDVLLNLVSIGTLFVFYMVANAVVYRRYVAAGTTNPWPTVSFLLSFSFTSIMFTLIWKCVPSGVAKAGMLSACGVVAIAILQLFHFTVPQARKPEFWGVPLMPWIPATSIFLNLFLLGSLDGPSYVRFGVFSVVAVLFYVLYSVHASYDAEGDGSLSQKNVEVHTESKESVDQSFKV 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04934 582 Gene3D Amino acid/polyamine transporter I 49 493 - -
Tsu01g04934 582 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 3 572 - -
Tsu01g04934 582 Pfam C-terminus of AA_permease 502 552 IPR029485 -
Tsu01g04934 582 PANTHER AMINO ACID/POLYAMINE TRANSPORTER I, CATIONIC AMINO ACID TRANSPORTER-RELATED 3 572 - -
Tsu01g04934 582 Pfam Amino acid permease 54 482 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04934 Tsu-Chr1 56273592 56277233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04934 141 567 Organic Solute Cotransporters AT3G10600 75.234 0.0 655
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04934 01 56273592 56277233 Tsu01g04934 01 56273592 56277233 ECH