Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04905 ATGGTCAATTATACTATGGAACATTCGGATTCAGAGATTCCTTTTCCTCTTTCTGCCATAACCGAAGCCTTTGAGGGTCTCTCTGAAAAGGTTAAGGGAATCAAAAATGGATCTACCGAACATCTTCGTTTGGATAATTTCTGTGAAATTGCTTCTCTTGTTTCTGTTCTTTTCCGTTGTCTTGGTCTTGCTTTCAAATTTGCTGAAATGGAATACGTTGCTaagCTGCATGCACTTGTGGAAGCATCAAAGACATATCAGACTCTACAAGATATAATTGACCATGATGTGGCCAATTACACTGTCAAAACATCAGGAAGCAATTCACGTAATCTACGCAGAGTTCGGCAGGGTCTTGATCTCGTTAGAGCTATATTCGACCAACTTTTGTCAACTAGTGATAGTTACCTAAAGGAAGTGGCTTCAACAGCTTATGCAGAGGTTTGTGCACCGTATCACACATGGGCGGTTAGAACAGCTGTTTATGCTGGAATGTATACGCTTCCGACAAGAGAACAGCTTTTTGTAAAGCTCAATGAAACAGAGCAATCAGCAGAAAAGAAGATGAGAAGATACATTTCTGCCTCACTTCCGATTATAGAATACATTGATAAATTGTACCTTTCTCGAAATATTGTATTGGACTGGTGA 651 0.3948 MVNYTMEHSDSEIPFPLSAITEAFEGLSEKVKGIKNGSTEHLRLDNFCEIASLVSVLFRCLGLAFKFAEMEYVAKLHALVEASKTYQTLQDIIDHDVANYTVKTSGSNSRNLRRVRQGLDLVRAIFDQLLSTSDSYLKEVASTAYAEVCAPYHTWAVRTAVYAGMYTLPTREQLFVKLNETEQSAEKKMRRYISASLPIIEYIDKLYLSRNIVLDW 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04905 216 Pfam Glycolipid transfer protein (GLTP) 43 180 IPR014830 GO:0005737|GO:0120009|GO:0120013
Tsu01g04905 216 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 14 216 - -
Tsu01g04905 216 PANTHER ACD11 HOMOLOG PROTEIN 14 216 - -
Tsu01g04905 216 SUPERFAMILY Glycolipid transfer protein, GLTP 40 213 IPR036497 -
Tsu01g04905 216 Gene3D Glycolipid transfer protein 8 216 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04905 Tsu-Chr1 56062612 56065207 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04905 16 216 Acyl Lipid Metabolism Gene Families AT4G39670 67.980 7.14e-100 287
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04905 01 56062612 56065207 Tsu01g04905 01 56062612 56065207 ECH