Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04889 ATGAGTGCTGCTGCTGCTTTTCTGATTCCAGTATCCTCGCTACCCTCTCTCGCTTCTCCTTTCAAGGGAAATGTGAAAACATTGGTAGCAAAACCATATCTATGTCCATGTCTTAAAATTCAACGAACAAAACCCCGTGTTTGTGTCATTAATAATAAGGCTGGTGTTTATGCTACTACGACGAAACCAGGCGGTGAAAATGTTCGGTTTAGGTTGGATAATTTAGGTCCTCAACCTGGTTCAAGAAGGAGAGCAAAGAGAAAGGGTAGAGGTATATCTGCAGGACAAGGAGCAAGTTGTGGTTTTGGAATGAGGGGTCAAAAATCAAGATCCGGACCTGGTATTATGAGAGGTTTTGAAGGTGGTCAGATGCCTCTTTACCGACGACTCCCCAAACTTAGAGGAATTGCAGGAGGTATGCACGCGGGATTGCCAAAATATGTCAATGTAAATCTGGAGGATATTGAAAACGCTGGATTTCAAGATGGGGAAGAGGTGTCTTTGGAGACATTGAAGGAGAAACGTGTGATCAACCCATCAGGAAGAGAACGGAAACTTCCTTTGAAGATTTTGGGTGATGGAGAACTAAGCAAGAAGTTAACAATAAAAGCCTGCTCCTTTTCGACAGCAGCAAAGGAGAAACTTGAGTCTGCTGGCTGTTCCCTCACCGTGCTGCCTGGCCGTAAGAAATGGGTTAAGGCAACAGTTACCAAAAACGTTGCTCGTGCTGAAGAATACTTTGCCAAGAAGCGAGGAGAAGCAGCTGCTTCTGAACCGGCCTCTGCTTAA 789 0.4487 MSAAAAFLIPVSSLPSLASPFKGNVKTLVAKPYLCPCLKIQRTKPRVCVINNKAGVYATTTKPGGENVRFRLDNLGPQPGSRRRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVNVNLEDIENAGFQDGEEVSLETLKEKRVINPSGRERKLPLKILGDGELSKKLTIKACSFSTAAKEKLESAGCSLTVLPGRKKWVKATVTKNVARAEEYFAKKRGEAAASEPASA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04889 262 MobiDBLite consensus disorder prediction 73 97 - -
Tsu01g04889 262 PANTHER BNAA06G33230D PROTEIN 16 261 - -
Tsu01g04889 262 Hamap 50S ribosomal protein L15 [rplO]. 72 225 IPR030878 GO:0003735|GO:0006412|GO:0015934
Tsu01g04889 262 ProSitePatterns Ribosomal protein L15 signature. 189 219 IPR001196 GO:0003735|GO:0005840|GO:0006412
Tsu01g04889 262 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 96 222 IPR021131 -
Tsu01g04889 262 SUPERFAMILY Ribosomal proteins L15p and L18e 73 224 IPR036227 -
Tsu01g04889 262 PANTHER 50S RIBOSOMAL PROTEIN L15 16 261 IPR005749 GO:0003735|GO:0006412|GO:0015934
Tsu01g04889 262 TIGRFAM rplO_bact: ribosomal protein uL15 72 222 IPR005749 GO:0003735|GO:0006412|GO:0015934
Tsu01g04889 262 Gene3D - 147 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04889 Tsu-Chr1 55888618 55894493 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04889 01 55888618 55894493 Tsu01g04889 01 55888618 55894493 ECH