Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04885 ATGGAGCTATCTCTAACTGCGACACACCGATTAGGATCACAAAACCAATTCCTTTTACCCTTAGAACACAATTCCTATAATCACTATCATCTATGTCCAATACCCATTTCAACCAAACTCAAGAAATTACCAAAAACAACACTTAGAGTGAGCGCAAAGAAAAAGTCAACTATTGAAGGTATCAGTGATGAGTTGAATTCCATAGCTTCTCTTAACCTTGATTTTGCACCCTCTCGTAGACAGGTTCGAGAAGCCTTCACTCATGTGCATCAGCAACTAGATCATTTCTTATTCAAGACTGCACCTCCTGGGATCATAACTCAAGaaTGGTATGAAAGGAATTCAAGGGGATTGGAGATTTTTTGCAAAAGTTGGATGCCAGAACATAAAGTTCCAATCAAGGGGGCTTTGTTTTTCTGTCATGGATATGGCAGTACTTGCACTTTCTTCTTTGAAGGTATTGCCAGGCGAATTGCTGCTTCCGGGTTTGGTGTTTATGCAATGGATTTTCCCGGTTTTGGTTTATCTGAAGGATTACATGGTTATATACCAAGTTTTGATGATTTGGTCGATGATGCTATAgaattttatacaaaaattaaagCTAGACCTGAGGTGAGAGGTTTGCCGCAATTTATATTTGGACAGTCAATGGGTGGAGCAATTGCTCTTAAAGCTCATTTGAAGCAACCAAATGATTGGGATGGAGTAATCCTTGTAGCTCCAATGTGTAAGATTTCAGAAGGCATGTTACCATCAACTACAATTTTGAAGGTGTTAACTTTCTTGTCTAAAATGATGCCAAAGGCAAAACTTTTCCCTTACAAGGATCTAACCGCGCTGATTATCCGAGAACCTGGCAAGAGAAAATGGgcCGGTTATAATGTTATTTCTTACGATGATCAAACGCGATTAAGAACTGGCATGGAACTCTTACGTGCCACTCAGGATATCGAGTCACGGTTAGAGAAGGTTTCAGCTCCATTATTGATTCTTCATGGAGCAGAGGATAAAGTGACAGATCCCTTGGTGAGCCAATATCTGTATGAGAAAGCATCTAGCAAAGATAAGACACTAAAGATCTATGAAGGAGGGTACCATGGCATTATGGAAGGTGAACCTGATGAAAGAATTTCTGCTGTACATAGTGACATTATCTCATGGCTTGAATTTAGGTGCACAAGATAA 1188 0.3914 MELSLTATHRLGSQNQFLLPLEHNSYNHYHLCPIPISTKLKKLPKTTLRVSAKKKSTIEGISDELNSIASLNLDFAPSRRQVREAFTHVHQQLDHFLFKTAPPGIITQEWYERNSRGLEIFCKSWMPEHKVPIKGALFFCHGYGSTCTFFFEGIARRIAASGFGVYAMDFPGFGLSEGLHGYIPSFDDLVDDAIEFYTKIKARPEVRGLPQFIFGQSMGGAIALKAHLKQPNDWDGVILVAPMCKISEGMLPSTTILKVLTFLSKMMPKAKLFPYKDLTALIIREPGKRKWAGYNVISYDDQTRLRTGMELLRATQDIESRLEKVSAPLLILHGAEDKVTDPLVSQYLYEKASSKDKTLKIYEGGYHGIMEGEPDERISAVHSDIISWLEFRCTR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04885 395 Gene3D alpha/beta hydrolase 106 393 IPR029058 -
Tsu01g04885 395 Pfam Serine aminopeptidase, S33 133 374 IPR022742 -
Tsu01g04885 395 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 46 393 - -
Tsu01g04885 395 SUPERFAMILY alpha/beta-Hydrolases 88 389 IPR029058 -
Tsu01g04885 395 PRINTS Alpha/beta hydrolase fold signature 162 177 IPR000073 -
Tsu01g04885 395 PRINTS Alpha/beta hydrolase fold signature 213 226 IPR000073 -
Tsu01g04885 395 PRINTS Alpha/beta hydrolase fold signature 329 343 IPR000073 -
Tsu01g04885 395 PANTHER PHOSPHOLIPASE-RELATED 46 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04885 Tsu-Chr1 55839230 55842393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04885 50 392 Acyl Lipid Metabolism Gene Families AT1G77420 62.391 4.42e-161 456
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04885 01 55839230 55842393 Tsu01g04885 01 55839230 55842393 ECH