Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04876 ATGCCTACAAAAGATGATAGCTCGGAGAAGGAGAAGTGTCTCGATCTCTTTCTAAAGATCGGTTTAGATGAACGCACTGCTCGTAACACCATCGCCAATAACAAAGTCACTACCAATCTCACTTCCGTTATCCACGAGGCTGGTGTTACTGATGGTTGCAGCAGAACTGTTGGAAACCTAATTTATACAGTTGCAACTAAGTATCCTGGAAATGCGTTGCTGCATCGTCCTACATTGCTTGAATACGTTGTTTCGTCCAAGGTGAAAACAACGGCGCAATTAGATGCAGCACTATCATTTCTTGCTGCCACGGGTTCGGAGAACCTTgatttgaagaaatttgaagaaGCATGTGGTGTTGGTGTTGAGGTTTCAACAGAAGATATCCGTCGTGCTGTTAATGAAGTTTTTGAGGAGAATAAAGCATCAATTCTGGAACTACGCTATCGAACGAATGTTGGTGAGTTACTTGGGCATGTGCGAAACAGGCTCCCATGGGCTGATGCAAAAGCTGTCAAGCAACTTGCTGATGCAAAATTATACGAGCTACTAGGTGATAAAACAGCAGCAGACAATGAAAAGCCTtctaaaaagaagaaagagaaaccTGCTAAAGTAGAGGATAAGGCGACACCTATTGCTACTCCTGAAAAGCCACCCGAAGAAGATCTCAATCCATTTTTGATATTCCCTAATCCAGAGGAAAATTTGAAGGTGCATACTGAAGTTCCGTTTAGTAATGGTACTATCCTGAGATGTTGCAATACAAAGGCGCTTCTTGACAAGCACTTGAAAGCAACAGGTGGGAAAGTTTTGACCCGGTTTCCTCCTGAGCCAAATGGATATTTGCATATTGGTCATGCCAAGGCAATGTTTATTGATTTTGGGTTGGCAAAAGACAGAGATGGAGGTTGCTACTTGAGGTATGATGATACAAATCCTGAAGCAGAAAAGAAAGAGTATATTGATCACATTGAAGAAATTGTCCAGTGGATGGGCTGGAAACCATTCAAGATTACTTACACAAGTGATTATTTCCAAGAACTGTATGAATTAGCTGTGGAGCTCATAACAAGGGGCTGTGCATATGTTGATCATCAGACACCTGATGAGATAAAGGAGTATAGAGAGAAGAAATTGAACAGTCCATGGAGAGACAGACCAATATCAGAATCATTGAATCTTTTTGAGGATATGAGACGCGGTCTTATAGAAGAAGGAAAAGCGACACTTCGAATGAAGCAAGACATGCAGAGTGATAATTACAATATGTATGACCTTATTGCATATCGAATTAAGTTTACTCCACATCCTCATGCTGGAGACAAATGGTGCATCTACCCAAGTTATGATTATGCTCACTGCATTGTGGATTCACTTGAGAATGTCACACATTCGCTATGTACTCTTGAGTTTGAGACACGCCGTGCTTCATACTATTGGTTGTTACACGCATTAGGTATTTACCAACCTTATGTATGGGAGTATTCAAGGTTGAATATCTCTAACACAGTAATGTCGAAGCGCAAGCTTAATCGTCTGGTGACTGAAAAGTGGGTTGATGGGTGGGATGATCCTCGACTGATGACATTAGCTGGTTTGCGGCGTAGAGGCATGACTTCAACAGCAATCAATTCTTTCGTTCGAGGAATTGGAATCACTAGAAGTGATGGAACTTTGATATCTGTGAGTCGCCTTGAATATCATGTTAGGGAAGAATTGAACAAAACAGCTCCTCGGACAATGGTTGTCCTGCACCCACTCAAGGTTGTTATTACTAATCTTGAAGCCAACTCAACAATTGAGGTTGATGGGAAAAAATGGCCTGATGCTCAAGCTGATGATCCATCTGCTTTCTATAAGGTAATTGGGTGA 1875 0.4085 MPTKDDSSEKEKCLDLFLKIGLDERTARNTIANNKVTTNLTSVIHEAGVTDGCSRTVGNLIYTVATKYPGNALLHRPTLLEYVVSSKVKTTAQLDAALSFLAATGSENLDLKKFEEACGVGVEVSTEDIRRAVNEVFEENKASILELRYRTNVGELLGHVRNRLPWADAKAVKQLADAKLYELLGDKTAADNEKPSKKKKEKPAKVEDKATPIATPEKPPEEDLNPFLIFPNPEENLKVHTEVPFSNGTILRCCNTKALLDKHLKATGGKVLTRFPPEPNGYLHIGHAKAMFIDFGLAKDRDGGCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWKPFKITYTSDYFQELYELAVELITRGCAYVDHQTPDEIKEYREKKLNSPWRDRPISESLNLFEDMRRGLIEEGKATLRMKQDMQSDNYNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSLENVTHSLCTLEFETRRASYYWLLHALGIYQPYVWEYSRLNISNTVMSKRKLNRLVTEKWVDGWDDPRLMTLAGLRRRGMTSTAINSFVRGIGITRSDGTLISVSRLEYHVREELNKTAPRTMVVLHPLKVVITNLEANSTIEVDGKKWPDAQADDPSAFYKVIG 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04876 624 MobiDBLite consensus disorder prediction 191 223 - -
Tsu01g04876 624 PRINTS Glutamyl-tRNA synthetase signature 274 286 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Tsu01g04876 624 PRINTS Glutamyl-tRNA synthetase signature 303 316 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Tsu01g04876 624 PRINTS Glutamyl-tRNA synthetase signature 448 458 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Tsu01g04876 624 Gene3D - 123 192 IPR042559 -
Tsu01g04876 624 PANTHER OS05G0182800 PROTEIN 13 622 - -
Tsu01g04876 624 CDD GlnRS_core 270 580 - -
Tsu01g04876 624 TIGRFAM glnS: glutamine--tRNA ligase 271 599 IPR004514 GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425
Tsu01g04876 624 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 12 169 IPR007639 GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418
Tsu01g04876 624 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 277 288 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Tsu01g04876 624 Gene3D HUPs 245 581 IPR014729 -
Tsu01g04876 624 PANTHER GLUTAMINE-TRNA LIGASE 13 622 - -
Tsu01g04876 624 Gene3D - 7 122 IPR042558 -
Tsu01g04876 624 SUPERFAMILY Nucleotidylyl transferase 270 584 - -
Tsu01g04876 624 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 172 247 IPR007638 GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425
Tsu01g04876 624 MobiDBLite consensus disorder prediction 191 216 - -
Tsu01g04876 624 Pfam tRNA synthetases class I (E and Q), catalytic domain 270 575 IPR020058 GO:0004812|GO:0005524|GO:0043039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04876 01 55752403 55759210 Tsu01g04876 01 55752403 55759210 ECH