Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04867 ATGTCAGAAAAAATGAAGGGCTCAAATAATCAATATACATCAAAGATTTTCAATGTTCAACTTCACTTTATTAGTTTTCTTACCTATATTCTAATTTTGGTATTTGGTTTAACACTTGGAATAATGATAAGTTTCTATCTTAAAGAGTGTACATTTAGTCTACAATTTACTCAGTTATCACTCTCTTCTTTACCAAGAACACCACCTTTGTCGCCGCTGATTGTTGCGAAACAAGAACGTGTTGGATTGAAGGAGTTTCTTAAACCTCCTCCTATTATGCATGATATGGATGATGAGGAATTGTTATGGAGAGCTTCTGTGGCTGCAAAAATACCCGATTACCCTTTTGAACGAATTCCTAAGGTTGCTTTCATGTTTTTGACAAAAGGTCCTGTGTTTTTGGCACCTTTGTGGGAACAGTTTTTCAAAGGGCATGAAGGGTATTACTCAATTTATGTGCATTCCAATCCTTCTTATAATGGATCACACCCTGAGAGTCCTGTTTTTCATGGCAGAAGAATTCCCAGTAAGGAAGTTGAATGGGGAAATGTGAACATGATTGAAGCTGAGCGTCGCTTACTAGCGAATGCACTTCTCGATATCTCAAACCAACGTTTTGTTCTTGTGTCAGAATCCTGCATACCACTCTTCAACTTCTCAACCATCTATTCTTACTTAATAAACTCTACACAAAATTATGTTATGGCTTATGACGATCCTAGCCCAGTTGGTCGCGGCCGTTATAGCATCCAGATGTTACCTGATGTTTCCCTCAGGCAATGGAGAAAAGGGTTCCAATGGTTTGAAATGGACAGAGATCTTGCTCTAGGAGTTGTATCTGATAGAGTATACTACCCAGTTTTTCATCAGTATTGCAAAGGTTCATGTTATGCAGATGAACATTACTTGCCAACTTTTGTTAGCATCAAGTTTTGGGAAGGAAATTCAAATAGGAGTTTGACTTGGGTTGACTGGTCAAAAGGGGGTCCACATCCAGCTCATTTTGTAAGATCTGATGTTAATGTTGAGTTTTTGGAGAGATTGAGGAGCAAGAAATGTGAGTATAATAATGGAAACAGCACCAATGCTTGTTATCTGTTTGCTAGGAAGTTCTTGCCTAGTACATTGTCAAAGCTCTTGAAGATTGCACCTGAGGTTATGCATTTTGAACACTATGATACGCACCAAAAACAGAAACCATCACTAAAATTAAGACCAATTAAttga 1227 0.3773 MSEKMKGSNNQYTSKIFNVQLHFISFLTYILILVFGLTLGIMISFYLKECTFSLQFTQLSLSSLPRTPPLSPLIVAKQERVGLKEFLKPPPIMHDMDDEELLWRASVAAKIPDYPFERIPKVAFMFLTKGPVFLAPLWEQFFKGHEGYYSIYVHSNPSYNGSHPESPVFHGRRIPSKEVEWGNVNMIEAERRLLANALLDISNQRFVLVSESCIPLFNFSTIYSYLINSTQNYVMAYDDPSPVGRGRYSIQMLPDVSLRQWRKGFQWFEMDRDLALGVVSDRVYYPVFHQYCKGSCYADEHYLPTFVSIKFWEGNSNRSLTWVDWSKGGPHPAHFVRSDVNVEFLERLRSKKCEYNNGNSTNACYLFARKFLPSTLSKLLKIAPEVMHFEHYDTHQKQKPSLKLRPIN 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04867 408 Pfam Core-2/I-Branching enzyme 122 348 IPR003406 GO:0016020|GO:0016757
Tsu01g04867 408 PANTHER CORE-2/I-BRANCHING ENZYME 75 389 - -
Tsu01g04867 408 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 13 65 IPR044174 GO:0016757
Tsu01g04867 408 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 75 389 IPR044174 GO:0016757
Tsu01g04867 408 PANTHER CORE-2/I-BRANCHING ENZYME 13 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04867 Tsu-Chr1 55678790 55680780 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04867 01 55678790 55680780 Tsu01g04867 01 55678790 55680780 ECH