Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04859 ATGGCCTCCGGTGAAGGGAGGCGACGTCATCATCATGGTCTTGTGCCACTTGCTGCATTGCTTAAGAGAGAGATGAAGAGTGAGAGGATGGAGAAGCCTACTGTGAGAATTGGTCAAGCAGCTCAGTCTAAGAAAGGGGAGGATTATTTTCTAGTTAAGACCGATTGTCAGCGCGTGCCCGGGAACTCTTCAACAGCCTTTTCTGTATTTGCGATCTTTGATGGACACAATGGAAATGCTGCTGCCGTTTTTACTAAGGAAAATTTGTTAAATCATGTGTTGTGTGCTCTTCCTCGAGGGCTTGGTCGTGATGAGTGGTTGCAAGCTTTACCTAGGGCATTGGTTGCTGGATTTGTTAAGACTGATAAAGAATTTCAGAGCAGAGgagaAACTTCTGGGACCACAGCCACGTTTGTGATAGTTGATCGGTGGACAGTGACAGTTGCATCTGTTGGAGATTCTCGTTGTATACTGGATACACAGGGTGGTGCTGTTACCACCTTAACAGTTGATCACAGACTAGAAGAGAATATTGAAGAGAGGGAACGTGTTACTGCAAGTGGAGGTGAGGTCGGGAGGCTTAGCATTGTCGGTGGTGCTGAGATTGGCCCCCTTCGATGCTGGCCAGGAGGTCTATGCCTTTCAAGGTCGATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAATACCATATGTCAAACAAGTGAAGCTATCAAAAGCTGGTGGGAGGCTTATAGTTGCTTCTGATGGCATATGGGATGCTGTATCATCAGAAATGGCTGCAAAATCTTGCCGTGGTTTGCCTGCTGAACTTGCTGCTATGCAGGTTGTCAAGGAAGCACTAAGAACTAGAGGGTTAAAGGATGATACAACATGCATAGTAGTTGACATAATCCCACCTGATAACGAATTGCCACCAACACCTCCCCCCAAAAAGCGGAATAAGCTGAGAGATCTTTTTTTGTTCAGGAAGAGGTCCCGTGATACCGCTGGCAAGCTGTCAAAGAAGCTTTCAACTATAAATATAGTTGAAGAACTGTTTGAAGAAGGATCAGCCATGCTTGCTGAAAGATTAGGAAATGACGAGAACTCGGGACAATCAACATCTGGCCTTTTTGTCTGTGCTGTATGCCAAGTTGATCTTGCTCCAAGCGAGGGCATATCTGTCCATGCAGGTTCAATTTTCTCTACAAGCTCGAAGCCATGGCAAGGTCCTTTTCTATGTTGTGATTGTCGCAATAAGAAGGATGCAATGGAAGGAAAGCGACCTAGTGGAGTTAAAGTGTCATAG 1293 0.4555 MASGEGRRRHHHGLVPLAALLKREMKSERMEKPTVRIGQAAQSKKGEDYFLVKTDCQRVPGNSSTAFSVFAIFDGHNGNAAAVFTKENLLNHVLCALPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTTLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIVASDGIWDAVSSEMAAKSCRGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPPPKKRNKLRDLFLFRKRSRDTAGKLSKKLSTINIVEELFEEGSAMLAERLGNDENSGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCCDCRNKKDAMEGKRPSGVKVS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04859 430 ProSiteProfiles PPM-type phosphatase domain profile. 29 298 IPR001932 -
Tsu01g04859 430 SMART PP2C_SIG_2 52 298 IPR001932 -
Tsu01g04859 430 SMART PP2C_4 26 296 IPR001932 -
Tsu01g04859 430 Pfam Protein phosphatase 2C 62 270 IPR001932 -
Tsu01g04859 430 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 4 429 - -
Tsu01g04859 430 SUPERFAMILY PP2C-like 42 298 IPR036457 -
Tsu01g04859 430 CDD PP2Cc 44 298 IPR001932 -
Tsu01g04859 430 Gene3D - 37 302 IPR036457 -
Tsu01g04859 430 PANTHER ALPHABET, ISOFORM E-RELATED 4 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04859 Tsu-Chr1 55608908 55612934 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04859 1 429 PP2C-type Phosphatase Gene Family AT1G68410 79.358 0.0 698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04859 01 55608908 55612934 Tsu01g04859 01 55608908 55612934 ECH