Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04851 ATGGCGAATTCTGATCTCTCCCTGCTTTTACCAAGGGTTCTCATCGTTTCTCGTCGTACCATtcgtaaaaacaaatttgttgattttgttgGTGAGTATCATCTGGATCTCATTGTAAGATATGGAGCTGTTCCAATCATTGTCCCAAGAGTGAGTGGAATTCACACTCTTTTAGATAGCTTTGAGCCAATCCATGGAGTTCTTCTTTGTGAAGGTGAGGACATTGATCCCTCTCATTATGATGATGCAGACCTATGTGGACTTACACCTGAAGAGCTTGAGCAAATAAGGCAACTTCACCCAAGTGATGCCACCATTGATAAAGAGAAAGACTCCATTGAGCTAAGACTTGCAAAGCTCTGCCTTGAAAGAAATATACCTTATTTGGGTATATGCAGGGGATCTCAAATCCTTAATGTTTCATGTGGAGGCACACTATACCAAGATATAGAGAAAGAGATATTAGAGAAAAACCATGAGTTTCAAAGAGTAGTTCACATGGACTATGGAAACTATGACGGACATCGTCATTCAATAAATGTAATCGAAAACACCCCTTTGCATGATTGGTTTAAGGACTCTTTTGTGGATGACAAACTGGAGATCATGGTGaatagttatcaccatcaagGTGTTAAGAGACTGGCAGAGAGATTTGTTCCAATGGCATTTGCTCCAGATGGTTTGATTGAAGGCTTTTATGATCCAAATAATTATAATCCTGAAGATGGTAAGTTTATTATGGGACTTCAATTTCATCCGGAGAGAATGAGGAACCATGATAGTGATGAATTTGATTATCCTGGATGCAGTAAGGCTTATCAGGAATTTGTGACGGCTGTAATAGCTTATGAGAAAAAACTTAGCAGCTCAATGCTTGTCCCAAAGTCCCCAAAGCTAAATGAGGAGCTGGAGCAAAAGAGAAAACTCATTCTGAGAAGCTTTTCAATGGCTAGAGACATTTACAAGTCTGATTCTCCTGTGGTTGCAAACCGAAATCCTGAACTTGAAGCAGGAGCAGACTTTCTACAGGCAAATACAGCATTGAGTTTGCAGCAGGAGAATAGGTTAAAGCAGGTTGGTGCGACAATTAGAAACGGTTCAAGTTACTCACACAAGATGAAATTGAATCAGATGAGGGAGAAGGCTGCTAGGAATATGATGTCAGATATGTCTGTGGAACAGTTAACAGATTTGGTCTCTTTCTACGGATTAATGCATCAGATATGTTCTGAGACAATTGACAGAAAGATGCATGAATTAGTCGTAGAAGAAAGTTGA 1281 0.3856 MANSDLSLLLPRVLIVSRRTIRKNKFVDFVGEYHLDLIVRYGAVPIIVPRVSGIHTLLDSFEPIHGVLLCEGEDIDPSHYDDADLCGLTPEELEQIRQLHPSDATIDKEKDSIELRLAKLCLERNIPYLGICRGSQILNVSCGGTLYQDIEKEILEKNHEFQRVVHMDYGNYDGHRHSINVIENTPLHDWFKDSFVDDKLEIMVNSYHHQGVKRLAERFVPMAFAPDGLIEGFYDPNNYNPEDGKFIMGLQFHPERMRNHDSDEFDYPGCSKAYQEFVTAVIAYEKKLSSSMLVPKSPKLNEELEQKRKLILRSFSMARDIYKSDSPVVANRNPELEAGADFLQANTALSLQQENRLKQVGATIRNGSSYSHKMKLNQMREKAARNMMSDMSVEQLTDLVSFYGLMHQICSETIDRKMHELVVEES 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04851 426 PANTHER CLASS I GLUTAMINE AMIDOTRANSFERASE-LIKE SUPERFAMILY PROTEIN 4 423 - -
Tsu01g04851 426 SUPERFAMILY Class I glutamine amidotransferase-like 29 260 IPR029062 -
Tsu01g04851 426 Pfam Peptidase C26 29 255 IPR011697 GO:0016787
Tsu01g04851 426 CDD GATase1_2 13 263 - -
Tsu01g04851 426 PANTHER GLUTAMINE AMIDOTRANSFERASE PB2B2.05-RELATED 4 423 IPR044668 GO:0016811
Tsu01g04851 426 Gene3D - 10 291 IPR029062 -
Tsu01g04851 426 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 23 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04851 Tsu-Chr1 55540475 55543182 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04851 01 55540475 55543182 Tsu01g04851 01 55540475 55543182 ECH