Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04849 ATGCCAATCCGTTCCAATGGACCTGGTTTGTTTGGTAGACCACTTCACGCAGTCCTTGGTGGAGGAAAGATTGCTGATATCTTGCTATGGAAAGACAAGAAATTATCGGCAGCATTTGTAGGTGGATTTTCAATGGTTTGGTTTCTCTTTGAAGTGGTTGAATATAATCTTGTTACTCTTCTATGTCACATCCTCATAGCACTTATGCTCATTCTCTTTGTTTGGCATAATGCAGCTGGACTTATCACTTGGAGACTTCCTGATATCTATGATCTTGAAATCCCAGATTACACCGTTAGATTCTTTCATAATAAGTTCAATTTCTTCTTGAGGAAATTTTATGACATTTCAACTGGAAAAGACCTCAGATTCTTCTTTGTGACAATTGCTGGCCTATGGATCATGTCTACTATTGGAAATTTCTTCAGCACTGTCAATTTACTATATACAACATTTTTATGCTTGGTGACAGTTCCCATTATGTATGAGAGGTATGAACATGAGGTGGATTATCTAGCAAGTAAAGGAAACCAAGATGTGAAGAGATTGTTCAACAAATTGGATTCAACAGTTCTCAACAGGATTCCAAGGGGAccagtgaaagaaaagaagTTAAGATGA 621 0.3639 MPIRSNGPGLFGRPLHAVLGGGKIADILLWKDKKLSAAFVGGFSMVWFLFEVVEYNLVTLLCHILIALMLILFVWHNAAGLITWRLPDIYDLEIPDYTVRFFHNKFNFFLRKFYDISTGKDLRFFFVTIAGLWIMSTIGNFFSTVNLLYTTFLCLVTVPIMYERYEHEVDYLASKGNQDVKRLFNKLDSTVLNRIPRGPVKEKKLR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04849 206 Pfam Reticulon 24 175 IPR003388 -
Tsu01g04849 206 PANTHER RETICULON 10 204 IPR045064 GO:0009617
Tsu01g04849 206 PANTHER RETICULON-LIKE PROTEIN B14 10 204 - -
Tsu01g04849 206 ProSiteProfiles Reticulon domain profile. 24 206 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04849 Tsu-Chr1 55529586 55531518 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04849 01 55529586 55531518 Tsu01g04849 01 55529586 55531518 ECH