Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04829 ATGTATCATCAGAATGGTTCTTTGGAGCGAAGAGCACAAGCATCAAACGGAGACATTGCTGCTACTAACAACAACGGTGTTGCTGTTGCTGCTATTTCCAATTCGAATCCAATAACAACAACAAGACTTCTCGGAAGCCCTAGAACTGATCACATGCCTGATAACTATGAAGACCTCCCTTTGGATTTCAACCCTCTTGTCTTCACTTCTCTTGAGAGACATCTTCCTTCCAATGTTATTAATCTCTCTAAAGACGTTAAAGCTCACTACATGTCTAACATTCTTCTCCGTTATTTGCCTCACTCTGAACGCGTTCGGATGCAAAAGCAAAAGGAATACAGGCAAAAGATCATATTAAATTACCCTCCGCTACATAAGGAGATATACACCATGCATAGTGAAAACTTTTTTACACCCTCATTTCTCAGAGCTATCAAAGCAAATACTGCAGCAAGTTTTAGAAGTATTATGGCCGAACCCTCCAGAGGAATTTTTACGTTTGAAATGCTTCAACCACAGTTTTGTGAAATGTTGGTATCTGAGGTAGATCATTTTGAAAGATGGGTCCATGAGACCAAATTCAGAATCATGCGACCTAATACAATGAATCAATATGGTGCCGTTCTTGACGATTTTGGCCTGGAAAACATGCTTGATAAATTGATGAATGATTTCATTCGCCCTATAGCTGGagttttctTTTCTGAAATTGGTGGATCCACATTGGACTCTCATCATGGTTTTGTTGTTGAATATGGAACCAATAGGGATGTGGACCTTGGGTTCCATGTGGATGACGCAGAAGTCAGCTTAAATATTTGCTTGGGAACACAATTTTCTGGCGGCGAACTGTTCTTCCGAGGTGTTCGATGTGATGAACATGTGCATACTGAGACCCAATCAGGGGAGATATTCGATTATTCCCATGTTCCAGGACATGCAGTCCTTCATTCTGGTCGCCACCGTCATGGTGCTAGACCTACAATATCTGGAAATCGTATCAATTTAATTCTCTGGTGTAGAAGTTCGGCGTTTAGAGAGATCAAGAAATATCAGAGAGAATTTCCTAACTGGTGTGGAGAATGCAGACGCAAGAAGAAGGAGAGAGAGCGTGTATCAATCGCTGCTACCAAAGAGGAATTACTAAAGAGGGAACTTAAATCAGCCTCGTGA 1173 0.4109 MYHQNGSLERRAQASNGDIAATNNNGVAVAAISNSNPITTTRLLGSPRTDHMPDNYEDLPLDFNPLVFTSLERHLPSNVINLSKDVKAHYMSNILLRYLPHSERVRMQKQKEYRQKIILNYPPLHKEIYTMHSENFFTPSFLRAIKANTAASFRSIMAEPSRGIFTFEMLQPQFCEMLVSEVDHFERWVHETKFRIMRPNTMNQYGAVLDDFGLENMLDKLMNDFIRPIAGVFFSEIGGSTLDSHHGFVVEYGTNRDVDLGFHVDDAEVSLNICLGTQFSGGELFFRGVRCDEHVHTETQSGEIFDYSHVPGHAVLHSGRHRHGARPTISGNRINLILWCRSSAFREIKKYQREFPNWCGECRRKKKERERVSIAATKEELLKRELKSAS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04829 390 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 20 388 - -
Tsu01g04829 390 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 243 342 IPR005123 -
Tsu01g04829 390 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 20 388 - -
Tsu01g04829 390 Gene3D q2cbj1_9rhob like domain 162 342 - -
Tsu01g04829 390 SMART p4hc 162 341 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04829 Tsu-Chr1 55289135 55295478 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04829 01 55289135 55295478 Tsu01g04829 01 55289135 55295478 ECH