Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04828 ATGGCTTGTGTAAAACTCAACTCTCTCTCTTCCCAATGGATCGCAAACAACCCTTTCTCATCTCACCGTGGATCTTCATCTATCTCCGCCGCCCCTCGCGGTGTTTCTCTTCGGATCCGCGCCTCTTACTCCGATGAACTCGTTCAAACCGCTAAATCTGTTGCATCTCGCGGTCGTGGAATTCTTGCAATTGATGAATCAAATGCAACCTGTGGGAAGCGTTTGGCATCAATTGGATTGGACAATACTGAGGTAAATCGTCAGGCTTACAGGCAACTTCTGTTGACAACACCCGGTCTTGGTGAATATATTTCCGGTGCCATTCTTTTTGAAGAAACACTTTATCAGTCAACAACTGATGGGAAGAAGTTTGTGGGTGTTCTCCGCGAGCAGAACATTGTACCTGGCATCAAAGTTGATAAGGGTTTGGTTCCTCTACCAGGGTCAAACAATGAATCTTGGTGCCAAGGGTTGGATGGATTGGCTTCTAGATCTGCTGAATACTACAAGCAAGGTGCCCGATTTGCCAAGTGGCGTACAGTTGTCAGCATTCCATCTGGTCCTTCTGCCTTGGCTGTTAAGGAAGCAGCTTGGGGACTTGCACGATATGCTGCTATCTCTCAGGACAATGGTCTCGTTCCAATAGTTGAGCCTGAAATTCTTCTTGATGGGGACCACCCAATTGAGAGGTCACTGGAAGTTGCCGAAAAGGTATGGTCAGAAGTCTTCTTCTATTTGGCACAAAACAATGTCCTTTTTGAGGGAATTTTGCTCAAGCCTAGCATGGTTACACCTGGTGCTGAGCACAAGCAAAGGGCTTCTCCAGAAACCGTTGCCAATTTTACATTAACCATGCTTAAAAGAAGAGTTCCTCCAGCAGTCCCCGGAATCATGTTTTTGTCAGGTGGACAATCAGAAGTTGAAGCAACACTAAATCTTAATGCTATGAACCAAAGTCCAAACCCATGGCACGTGTCTTTCTCATATGCACGAGCTCTGCAGAACACCGTTCTTAAGACATGGCAAGGTCGCCCTGAGAATGTAGAAGCAGCTCAAAAGTCTCTTTTGGTCCGCGCCAAAGCCAACTCCTTGGCTCAGCTCGGAAGATACTCTGCCGAAGGTGAAAATGAAGAAGCCAAGAAGGGAATGTTCGTCAAGGGCTACACCTACTAG 1173 0.468 MACVKLNSLSSQWIANNPFSSHRGSSSISAAPRGVSLRIRASYSDELVQTAKSVASRGRGILAIDESNATCGKRLASIGLDNTEVNRQAYRQLLLTTPGLGEYISGAILFEETLYQSTTDGKKFVGVLREQNIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPSGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERSLEVAEKVWSEVFFYLAQNNVLFEGILLKPSMVTPGAEHKQRASPETVANFTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTVLKTWQGRPENVEAAQKSLLVRAKANSLAQLGRYSAEGENEEAKKGMFVKGYTY 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04828 390 Pfam Fructose-bisphosphate aldolase class-I 46 390 IPR000741 GO:0004332|GO:0006096
Tsu01g04828 390 Gene3D Aldolase class I 29 389 IPR013785 -
Tsu01g04828 390 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 28 390 IPR000741 GO:0004332|GO:0006096
Tsu01g04828 390 SUPERFAMILY Aldolase 40 390 - -
Tsu01g04828 390 CDD FBP_aldolase_I_a 44 370 - -
Tsu01g04828 390 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 251 261 IPR029768 -
Tsu01g04828 390 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 28 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04828 Tsu-Chr1 55284137 55287049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04828 41 390 Miscellaneous Gene Families AT3G52930 53.955 2.51e-131 379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04828 01 55284137 55287049 Tsu01g04828 01 55284137 55287049 ECH