Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04816 ATGGAAAAAAGTTTGTTAGAGAAAGATAGAGAGGGTGGATCAAGCAGCATAACATGGAGAGTATTTGTTCAAGAGGTCAAAGATGTTGCTTTTCTAGCTTTACCTATGATTACTGTCACTTTATCACAGTATTTTCTGCAAATCATTTCAATGATGATGGTTGGTCGTTTGGGTAAACTTGCTCTCTCTAGTACAGCAATTGCTATCTCTCTTTGTGGTGTTACTGGCTTCAGTGTTCTTTTTGGAATGTCATGTGCACTTGAAACTCAATGCGGACAAGCTTATGGTGCTAAGCAATATAGAAAATTTGGTGTTCAAATTTACACTGGTATCATTTCTCTTATTATAGCTTGTGTTCCTCTCTCTATATTATGGATCAACATGGGGAAGCTATTGACTTTAATTGGCCAAGACCCTTTGATTTCACATGAAGCTGGAAAATTTGTGATGTGCATGATTCCTGCTCTATTTGCTTATGCAACACTTCAAGGACTGGTCAGATACTTTCTGATGCAAAGTCTGATATATCCGCTTGTTATAAGTTCCTCTGTTACACTTTGCTTCCATATAGCTTTTTGTTGGTTGCTAGTTTTTAAATCCGGATTAGGTTGCTTAGGAGCTGCATTATCTATTGGTACTTCATATTGGTTGAATGTGATTATACTTGGATTATATATGAAATTCTCTGCTGATTGTGAAAAGACTCGGGTTCCGATTTCAATGGAGTCATTCAATGGAATAGGAGAGTTCTTTCGCTATGCGATTCCTTCAGCAGGAATGATCTGCCTTGAGTGGTGGTCATTTGAGCTCTTAATCGTTCTTTCTGGCCTTCTACCAAATCCACAGCTTGAAACTTCAGTTTTATCCATATGTTTATCTATCATCTCAACAATCTATACAATACCAGAAGCAACTGGCTCGGCAGCAAGCTCTAGAGTTTCAAATGCATTAGGAGCTGGATGTGCACAAGCAGCGCGGTTATCTGTTTATGCTGCCATGACTGTTGCAGTTTCTGAGGCTATTTTGGTGAGTTCCACCATTTTCGCCTCTCGACACATTTTAGGTTATCTATTTAGCAATGAGCAGGACGTGGTGGATTATGTCACGGATATGGTTCCTCTGATAAGTATAAATGTTATAGTGGATAGTTTACATGGTACCCTTTCAGGTATTGCTAGAGGATCTGGTTGGCAGAAGTTGGGAGCATATGTGAACCTCGGAGCCTATTATGTTTTTGGAATTCCAATTGCCATTTTATTGGGTTTCTGGTTTGAGTTAAGAGGAAAAGGCCTGTGGATTGGGATACTTGTTGGTGCCTTCTGTCAAGCATTTTTGCTAGCCCTTATAACAAGTCTTACAAATTGGGAAAAACAGGCAATTAAGGCACGAGAAAGGATATTTCAAGGAAGTTTTGCAGTAGAAGATAGATTAGTTTAA 1437 0.389 MEKSLLEKDREGGSSSITWRVFVQEVKDVAFLALPMITVTLSQYFLQIISMMMVGRLGKLALSSTAIAISLCGVTGFSVLFGMSCALETQCGQAYGAKQYRKFGVQIYTGIISLIIACVPLSILWINMGKLLTLIGQDPLISHEAGKFVMCMIPALFAYATLQGLVRYFLMQSLIYPLVISSSVTLCFHIAFCWLLVFKSGLGCLGAALSIGTSYWLNVIILGLYMKFSADCEKTRVPISMESFNGIGEFFRYAIPSAGMICLEWWSFELLIVLSGLLPNPQLETSVLSICLSIISTIYTIPEATGSAASSRVSNALGAGCAQAARLSVYAAMTVAVSEAILVSSTIFASRHILGYLFSNEQDVVDYVTDMVPLISINVIVDSLHGTLSGIARGSGWQKLGAYVNLGAYYVFGIPIAILLGFWFELRGKGLWIGILVGAFCQAFLLALITSLTNWEKQAIKARERIFQGSFAVEDRLV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04816 478 Pfam MatE 256 418 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu01g04816 478 Pfam MatE 35 195 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu01g04816 478 PANTHER MULTIDRUG RESISTANCE PROTEIN 6 464 - -
Tsu01g04816 478 CDD MATE_eukaryotic 25 461 IPR045069 GO:0042910|GO:1990961
Tsu01g04816 478 PANTHER PROTEIN DETOXIFICATION 6 464 - -
Tsu01g04816 478 TIGRFAM matE: MATE efflux family protein 35 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04816 Tsu-Chr1 55158402 55161954 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04816 01 55158402 55161954 Tsu01g04816 01 55158402 55161954 ECH