Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04815 ATGATTGTTGGTCATTTAGGTGAACTCTATCTCTCTAGCGCCGCCTTATCCATCTCCTTCACCAGTGTCACCTGTTTCAGCTTCCTGATGGGAATGGCTAGTGGACTAGAAACAACATGTGGACAAGCTTATGGAGCTAAACAATATCAAAGAATAGGAATGCAAACATACACAGCTATATTTTCTCTCATATTAGTTTGTATTCCACTCTCTATCATTTTGATCAACATTGAAAACATATTAGTTTTCACAGGACAAGACCCTCTAATTGCACATGAAGCTGGAAGATTCACAATTTGGCTTCTTCCAGCAGTTTTTGCATATGCAATATTGCAACCACTAGTTAGATATTTTCAAATACAAAGCTTGCTTTTTCCAATGCTTCTAAGCTCTTGTGTCACTCTTGGTATCCATGTACCTCTTTGTTGGGCTTTGGTATTCAAGACAGGGTTGAGTAATGTTGGTGGTGCAATAGCAATGAGTATTTCCATTTGgttgaatgttatttttcttgGATTATATATGAGATTCTCTTCCGCGTGCGCAAAAACTAGAGCTCCAATTTCTATGGAACTATTTCAAGGAACTTGGGAGTTTTTTCGCTTTGCCATACCTTCCGCAATAATGATTTGCCTTGAATGGTGGTCATTTGAGCTAACGGTTCTGCTCTCTGGGCTGTTACCAAATCCACAACTTGAAACTTCTGTTCTATCTGTTTGTTTATCAATCATCTCGACAATCTATACAATACCAGAAGCAACTGGTTCAGCAGCAAGTGCTAGAGTTTCAAATGCATTAGGAGCTGGATATCCACAAGCAGCGCGATTGTCTGTTTATGCTGCTATGACTCTTGCAGTTTCTGAGGCTATTTTGGTGAGTTCCACCATTTTCGCCTCTCGACGGATTTTAGGTTATATATTTAGCAATGAGCAGGACGTGGTGGATTATGTCACAGATATGGTTCCTCTGATGAGTATATCTGTTATAATGGATAGTTTACATGGTACCCTTTCAGGTATTGCTAGAGGATGTGGTTGGCAGAAGTTGGGAGCATATGTGAACCTTGGAGCTTACTATGTTTTCGGAATTCCAATTGCTATTATATTGGGTTTCTGGTTTGAGCTTAGAGGAAAAGGCCTGTGGATTGGTTTAACTGTTGGTGCCTTCTGTCAAGCACTTTTGCTTTCCCTTATTACAAGTTTTACAAACTGGGAAAAACAGGCAATTAAGGCGCGGGAAAGAATATTTCAAGGAAATCTTGCAGTAGAAGATAGATTAGTTTGA 1284 0.391 MIVGHLGELYLSSAALSISFTSVTCFSFLMGMASGLETTCGQAYGAKQYQRIGMQTYTAIFSLILVCIPLSIILINIENILVFTGQDPLIAHEAGRFTIWLLPAVFAYAILQPLVRYFQIQSLLFPMLLSSCVTLGIHVPLCWALVFKTGLSNVGGAIAMSISIWLNVIFLGLYMRFSSACAKTRAPISMELFQGTWEFFRFAIPSAIMICLEWWSFELTVLLSGLLPNPQLETSVLSVCLSIISTIYTIPEATGSAASARVSNALGAGYPQAARLSVYAAMTLAVSEAILVSSTIFASRRILGYIFSNEQDVVDYVTDMVPLMSISVIMDSLHGTLSGIARGCGWQKLGAYVNLGAYYVFGIPIAIILGFWFELRGKGLWIGLTVGAFCQALLLSLITSFTNWEKQAIKARERIFQGNLAVEDRLV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04815 427 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 413 - -
Tsu01g04815 427 Pfam MatE 1 143 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu01g04815 427 Pfam MatE 205 368 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu01g04815 427 CDD MATE_eukaryotic 1 410 IPR045069 GO:0042910|GO:1990961
Tsu01g04815 427 PANTHER PROTEIN DETOXIFICATION 1 413 - -
Tsu01g04815 427 TIGRFAM matE: MATE efflux family protein 1 381 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04815 Tsu-Chr1 55115470 55156378 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04815 01 55115470 55156378 Tsu01g04815 01 55115470 55156378 ECH