Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04814 atggGTGAAGAGAGAAGCACGATGGAGGAAACTCTACTAGCAAAAGTACAAATTGATTCAAAAACAGAGAGCCATGAAGAAGAACAGAGTAAAGAAAGATTAATTAGTTGGGATATTTACATAAAAGAATTGAAGAGGATTTGTCACATATCAGGACCTATGGTAGCTGTAGTTTTATCACAATATCTGTTACAAGTTGTTTCAACGATGATTGTTGGTCACTTAGGTGAACTCTATCTTTCTAGCGCCGCCTTATCTATCTCCTTCACCGGTGTCACTGGTTTCAGCTTCCTGATGGGAATGGCTAGTGGACTAGAAACAACATGTGGACAAGCTTATGGAGCTAAACAATATCAAAGAATAGGAATGCAAACATACACAGCTATATTTTCTCTCATATTAGTTTGTATTCCACTCTCTATCATTTTGATCAACATTGAAAACATATTAGTTTTCACAGGACAAGACCCTCTAATTGCACATGAAGCTGGAAGATTCACAATTTGGCTTCTTCCAGCAGTTTTTGCATATGCAATATTGCAACCGCTAGTTAGATATTTTCAAATACAAAGCTTGCTTTTTCCAATGCTTCTAAGCTCTTGTGTCACTCTTGGTATCCATGTACCTCTTTGTTGGGCTTTGGTATTCAAGACAGGGTTGAGTAATGTTGGTGGTGCAATAGCAATGAGTATTTCCATTTGgttgaatgttatttttcttgGATTATATATGAGATTCTCTTCCGCGTGCGCAAAAACTAGAGCTCCAATTTCTATGGAACTATTTCAAGGAATTTGGGAGTTTTTTCGCTTTGCCATACCTTCTGCAGTAATGATTTGCCTTGAATGGTGGTCATATGAGCTAATTGTCTTGCTCTCTGGGCTGTTACCAAATCCACAACTTGAAACTTCTGTTCTATCTGTTTGTCTCAATACCATTGCAACTCTCTATACAATACCATTTGGAATTGGTGCTGCAGCAAGCACAAGAGTTTCAAATGAATTAGGAGCTGGGAATCCATTTGAAGCACGCGTCGCTGTATTGGCTGCTATGTCACTATCACTCATTGAAACCAGTATAGTGAGTTCAACGCTATTTGCATGCCGCCATGTTTATGGTTACGTTTTCAGCAACGATAAAGAAGTTGTGGATTATGTCACTGTCCTGGCTCCTCTGGTTTCTTTATCTGTTATATTCGATAGCGTACAAGGCGTTCTTGCAGGGGTTGCTAGAGGTTGTGGATGGCAACACCTAGGAGTTTATGTCAATCTAGGAGCATTCTACCTCTGTGGGATTCCTGCTGCTGCTGCATTGGCATTTTGGGTTCAAGTGGGAGGAAAAGGACTATGGATTGGTATACAAGTTGGTGCTTTTGTTCAATGTGTTCTTCTTTCCATCATAACATGTTGTATAAATTGGGAGCAACTGGCAATGAAGGCTAGACACAGGTTGTTTGATGCTCAATTATCAGGAGAGAATAATAGACTGGTATGA 1494 0.3902 MGEERSTMEETLLAKVQIDSKTESHEEEQSKERLISWDIYIKELKRICHISGPMVAVVLSQYLLQVVSTMIVGHLGELYLSSAALSISFTGVTGFSFLMGMASGLETTCGQAYGAKQYQRIGMQTYTAIFSLILVCIPLSIILINIENILVFTGQDPLIAHEAGRFTIWLLPAVFAYAILQPLVRYFQIQSLLFPMLLSSCVTLGIHVPLCWALVFKTGLSNVGGAIAMSISIWLNVIFLGLYMRFSSACAKTRAPISMELFQGIWEFFRFAIPSAVMICLEWWSYELIVLLSGLLPNPQLETSVLSVCLNTIATLYTIPFGIGAAASTRVSNELGAGNPFEARVAVLAAMSLSLIETSIVSSTLFACRHVYGYVFSNDKEVVDYVTVLAPLVSLSVIFDSVQGVLAGVARGCGWQHLGVYVNLGAFYLCGIPAAAALAFWVQVGGKGLWIGIQVGAFVQCVLLSIITCCINWEQLAMKARHRLFDAQLSGENNRLV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04814 497 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 483 - -
Tsu01g04814 497 TIGRFAM matE: MATE efflux family protein 53 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu01g04814 497 Pfam MatE 53 212 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu01g04814 497 Pfam MatE 274 434 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu01g04814 497 PANTHER PROTEIN DETOXIFICATION 21 483 - -
Tsu01g04814 497 CDD MATE_eukaryotic 43 477 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04814 Tsu-Chr1 55107168 55111999 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04814 01 55107168 55111999 Tsu01g04814 01 55107168 55111999 ECH