Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04809 atGTCAATCCTTTCTCTCACACCGTCTCATCCTCTTACCCTTCACTCCCATGCGCACTTTAGCCCCTCCCCCTTTCCCATGTCCATCTTACGCCGTCTCAATCTAAACTTCACCAACCACCGTCACTCTCTCCGTCGCCGATTCGCCACCGTTTCCGCTGCCGTACGTCAAGACACAACCGTCTGGACTCCACTTCCTCTCTCCGAAATCGAACCAGCCGCTGAATCGCTATTCCATATCGCCATCGACGTTTCTGACGCGCCGGACCTTGCTACATCACATACACGCGCCGGACAGTATCTTCAACTTAAAGTTGCTGATTCGCCTAAACCGTCGTTTCTTGCAATCGCATCGCCGCCGAAGCTTGCGATTAAGCGTGGTGTGTTTGAGTTTTTGGTGAAGAGTGTGGCTGGGTCCACTGCTGAAGCGTTGTGTGCGTTGAAGAAAGGTGATGTGGTTGAACTCAGTCAGGTTATGGGGAATGGATTCGATATTAGTCGGATCGAACCGCCGGAGGAATTTGGAACTGTTATTGTCTTTGCCACTGGATCCGGAATTAGTCCAATTCGGTCACTTATTGAGTCAGGATTTGGTGCTGGCAAGAGGTCTGATGTGAGACTATATTATGGGGCCAGAAACCTTCAGAGAATGGCTTATCAGGATAGATTTAAAGACTGGGAATCTTCCGGTGTCAAGATTGTGCCTGTATTGTCTCAGCCAGATGATAGTTGGACTGGAGAAAGTGGCTTTGTACAGGCTGCATTTACAAGAGCAAAGGAAATATCTAACCCGTTGTCAACCGGTGCTGTACTCTGTGGGCAAAAGCAGATGACCGAGGAAGTTACATCTATTCTTGTTGCTGATGGAGTATCAGCTGAGAAGATACTAAAGAACTTCTGA 900 0.4867 MSILSLTPSHPLTLHSHAHFSPSPFPMSILRRLNLNFTNHRHSLRRRFATVSAAVRQDTTVWTPLPLSEIEPAAESLFHIAIDVSDAPDLATSHTRAGQYLQLKVADSPKPSFLAIASPPKLAIKRGVFEFLVKSVAGSTAEALCALKKGDVVELSQVMGNGFDISRIEPPEEFGTVIVFATGSGISPIRSLIESGFGAGKRSDVRLYYGARNLQRMAYQDRFKDWESSGVKIVPVLSQPDDSWTGESGFVQAAFTRAKEISNPLSTGAVLCGQKQMTEEVTSILVADGVSAEKILKNF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04809 299 Gene3D Translation factors 55 160 - -
Tsu01g04809 299 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 60 165 IPR017927 GO:0016491
Tsu01g04809 299 PANTHER - 11 299 - -
Tsu01g04809 299 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 171 296 IPR039261 -
Tsu01g04809 299 CDD FNR_like 68 296 - -
Tsu01g04809 299 SUPERFAMILY Riboflavin synthase domain-like 62 162 IPR017938 -
Tsu01g04809 299 Pfam Oxidoreductase NAD-binding domain 181 281 IPR001433 GO:0016491
Tsu01g04809 299 Gene3D - 174 299 IPR039261 -
Tsu01g04809 299 PRINTS Phenol hydroxylase reductase family signature 95 107 - -
Tsu01g04809 299 PRINTS Phenol hydroxylase reductase family signature 178 197 - -
Tsu01g04809 299 PRINTS Phenol hydroxylase reductase family signature 203 212 - -
Tsu01g04809 299 PANTHER F9L1.8 PROTEIN 11 299 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04809 01 55078538 55082854 Tsu01g04809 01 55078538 55082854 ECH