Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04804 ATGAAGAATTCAAGtggcgaagaagaagaagaagcattGTCAAGAGCTGCAAAATCCACAGATGAACTTTACCTTCTTCGTGACACTTATTTCCCTCAAAACCCTCACGATAGAATCTCTTCATTGCAACAACTTTCCGATCTCATTCTCAATCTCCTCGATTCCGTTCCTCCAGAAGAAAGAAAATCACCTGCGCAACGGGCTATATATGAATATCTTAGAGGGAAAGTGTTAGATGTATTTCCCGAATATAAGAAAGAAGCTGAGGATCATCTATCAAAAGCTGTTAAGCTGAACCCGTCTCTTGCTGATGCTTGGCTATGTTTAGGAAACTGTATTTGGAAAAAAGGAGATTTATCTGCTGCAAAAAACTGCCTCAATCTTGCGTTAAACAAGGGTCCTAACAAAAAGATTCTTTGTCAATTATCAATGCTTAAAAGAAGCATGTCTCAAGGTGCGGATAATCAAGCAGAACTTGTTGATGAAAGCATTCAACATGCCAAGGAAGCAATTGCTTTGGATGTCAAGGATGGGAACTCTTGGTATAATCTTGGAAATGCATAtcttacaagtttttttgtcaCTGGAGGTTGGGATCATACAAGACTTTCACATTCTTTAAAAGCATATCAAAATGCTGAGAAGGATGAAGGGATCAAGTCCAATCCCGACTTTTACTTCAACAGTGCCACTGCTAACAAATATCTAGAGAACTACGAGAGGGCCCTTAGTGGATTTGAGGCCGCTGCTTTGAAGGATCCAGGTCTCAATGCTGCAGAGGAGGTTCAGAAAATTGTCAATTTACTTGACAAGGTGGACAATCTTTTGAGGGTGAATGTAAGAGCTAAACGAGTCGCCTCTTTGGCAGCATCATTGGCTGTTGTAAATTTGAAATCGCCATACAGAACAGTTACCATAGACCTTCTGTCAGAGGGTCTTAATAGAGCTCTAGCTGTACAGGGGAAGGTGATATTCTTTATTAGGAGTGACGGTGTTGCTCCTCTATACTATTTGTTGTGTGATTCAAACCAAACTTGCTTTGTTCTCTCAGTTTATGGTGTGCGTCAGGATGTGATTAAAGGAGGAGATCAGCTCACATTGCTGGATCCTTGTTTTCGTGACGTTGATGTCGCCTGGAAGGAGAAGcattACCAGTTCAAATCTACACGCCTGGATTTCTACGAGCAAGTGCTTGTTAATGGAAAAGCTCTGACTCCGCAGCAAGCTATTCATACGTCGATATATGCACAACATAAACCATGA 1263 0.3975 MKNSSGEEEEEALSRAAKSTDELYLLRDTYFPQNPHDRISSLQQLSDLILNLLDSVPPEERKSPAQRAIYEYLRGKVLDVFPEYKKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSAAKNCLNLALNKGPNKKILCQLSMLKRSMSQGADNQAELVDESIQHAKEAIALDVKDGNSWYNLGNAYLTSFFVTGGWDHTRLSHSLKAYQNAEKDEGIKSNPDFYFNSATANKYLENYERALSGFEAAALKDPGLNAAEEVQKIVNLLDKVDNLLRVNVRAKRVASLAASLAVVNLKSPYRTVTIDLLSEGLNRALAVQGKVIFFIRSDGVAPLYYLLCDSNQTCFVLSVYGVRQDVIKGGDQLTLLDPCFRDVDVAWKEKHYQFKSTRLDFYEQVLVNGKALTPQQAIHTSIYAQHKP 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04804 420 Pfam Tetratricopeptide repeat protein 5 OB fold domain 301 411 IPR032076 -
Tsu01g04804 420 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 13 344 - -
Tsu01g04804 420 SMART tpr_5 103 136 IPR019734 GO:0005515
Tsu01g04804 420 SMART tpr_5 68 102 IPR019734 GO:0005515
Tsu01g04804 420 SMART tpr_5 223 256 IPR019734 GO:0005515
Tsu01g04804 420 SUPERFAMILY TPR-like 86 247 IPR011990 GO:0005515
Tsu01g04804 420 Gene3D - 280 419 IPR038645 -
Tsu01g04804 420 Gene3D Tetratricopeptide repeat domain 5 279 IPR011990 GO:0005515
Tsu01g04804 420 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 13 344 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04804 01 55036310 55044724 Tsu01g04804 01 55036310 55044724 ECH