Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04770 ATGACTAAAGAAGAAGACTTTAAGCTCCTTAAAATCCAGACTTGTGTTCTCAAAGTGAACATTCACTGTGATGGTTGTAAGCAGAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGGGTTTACCAAGTTCAAATAGATGCAGAACAGCAGAAGGTAACAGTTTCAGGCAGTGTGGATGCTGCAACCTTGATCAAGAAACTAGTAAGATCTGGCAAATATGCTGAGTTATGGTCTcagaaaactaataataatcaGAATCAAAAGCAGAAGAACAACAACATTGTCAAAGATGACAAGAACAAAGGACAAAAACAAGTTGTTGTCAAAGGACTTGAGGCCTTCAAAAACCAGCAGAAATTTCCTGCTTTTAGTTCTGAAGAGGATGGTGGATACTACGGAGGATACGGTGACGATGACGACGAAGAGGAGGAGGATCAAGAGACGCGGTACATAAGGGAGGCAGCCAATCAAATTCAAATGATGAGGCAACAAGTAGTTGATGCAAACAATGCGAAGAAAGCTATTGGAGCTAAGATGAACAATGCTGGCAATGTGAATGGGAATAGTGGCAAGAAAGGAAACTCAAATCAGAACATGGTAGGAATGAAGGAAAGTGCTAATGGGGTTGATCAGAAAACAATTGCAGCAATGAAGTTGAACAATGGTCATTTAGTTGGTAATGAAAGCATGAATCTTGGAGAATCTAAAAGGGTTAGTGACATTGGTGCTATGATGAATTTAGCTGGTTTTAATGGTAATAACAATGTTGTTGGTAATGCTACTATTCTAGGCGGAAATTCCAATGGTTTAGGAGGTTTTCCTGTTCAATCCAATAATACTAATATGATTCAAGGATCTTCTGCTGCAACTATTCCAAATGGTGGTTTTGTAACTGGTCAAATTCCACCATCAATGATGATGAACATGAATGGTTTTAACAACCATCCATCTTCATTGATGAACATGAACATGCAGCAAGCAAGGCATGTTATGCAGCAGCAACAGCCTCAGATGATGTATCATAGGTCACCTTATGTTCCTCCTAACACTGGCTATTATTACAACAATTACAATAACTACATTCCTCCAAATGCAACAAATTACTCATCCTATGCAATGCCTAGTTATCCAACGGAGGATAACTCTGCAGCACACATGTTCAGTGATGACAATACTACAAGCAGCTGTTCAATAATGTAA 1200 0.3842 MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDAATLIKKLVRSGKYAELWSQKTNNNQNQKQKNNNIVKDDKNKGQKQVVVKGLEAFKNQQKFPAFSSEEDGGYYGGYGDDDDEEEEDQETRYIREAANQIQMMRQQVVDANNAKKAIGAKMNNAGNVNGNSGKKGNSNQNMVGMKESANGVDQKTIAAMKLNNGHLVGNESMNLGESKRVSDIGAMMNLAGFNGNNNVVGNATILGGNSNGLGGFPVQSNNTNMIQGSSAATIPNGGFVTGQIPPSMMMNMNGFNNHPSSLMNMNMQQARHVMQQQQPQMMYHRSPYVPPNTGYYYNNYNNYIPPNATNYSSYAMPSYPTEDNSAAHMFSDDNTTSSCSIM 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04770 399 MobiDBLite consensus disorder prediction 80 101 - -
Tsu01g04770 399 ProSiteProfiles Heavy-metal-associated domain profile. 20 76 IPR006121 GO:0046872
Tsu01g04770 399 MobiDBLite consensus disorder prediction 132 147 - -
Tsu01g04770 399 MobiDBLite consensus disorder prediction 123 147 - -
Tsu01g04770 399 CDD HMA 16 75 IPR006121 GO:0046872
Tsu01g04770 399 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 399 - -
Tsu01g04770 399 Gene3D - 12 84 - -
Tsu01g04770 399 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Tsu01g04770 399 Coils Coil 151 171 - -
Tsu01g04770 399 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 37 1 399 - -
Tsu01g04770 399 Pfam Heavy-metal-associated domain 17 69 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04770 Tsu-Chr1 54832396 54834758 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04770 01 54832396 54834758 Tsu01g04770 01 54832396 54834758 ECH