Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04073 ATGATGCCCCCTGAGCAAGAAACAACTATTAATGCACCAAATAGCATTTCACCAAATTCAAATAGAACAGAGAATATCTCTATCCATGGTGATCCAGAAGGTTCTTCTTCTAATAAAGTTAAACCCAGTTTGGATATTGATCATAACGCCATTAATATTCCTTCTCATCCAACTACACCAATAACTTCATTTTCCATTCTTCCTCAATCCTTGCGCCCAATTACCATCAAATTTGAAGATGTTTCATATAGCATAACCTTAacaaaccaaaagaaaaatggttGTGTTTTGGGAAAAGAATCAAAAGTAACAAGAACAATACTCAATGGAGTCACTGGAATAGCAAAACCGGGTGAGTTAACGGCAATGTTGGGTCCGTCAGGAAGTGGCAAAACCACCCTACTAACTGCCTTAGCCGGAAGACTAACCGGAAAAGTCACCGGAACAATAACATACAACGGAAACTCGGACTCATCCTACATTAAACGTAAAATAGGTTTTGTTTCTCAAGACGACGTTGTTTACCCTCACTTAACAGTGTTAGAAACATTAACCTACACTGCTCTATTAAGACTTCCTAAAACACTCACCCGAGGAGAGAAAATTGAACACGCAGAGAGGATAATTACGGAATTAGGCCTCACGCGCTGTCGAAATTCTCCTGTGGGTGGGTGTATGGGACTTTTCCGGGGAATCTCCGGAGGAGAAAGGAAAAGGATGAGTATTGGACAAGAAATGTTGGTGAACCCAAGTTTATTGTTGTTAGATGAACCAACTTCCGGTTTGGATTCGACCACGGCTCAACTTATTGTTTCGGTTCTTAAGGGACTGGCTCGGTCCGGTCGAACCATTGTTACTACTATTCATCAACCTTCAAGCCGGTTGTATAGGATGTTTGATAAAGTCGTGGTTTTGTCCGATGGGAACCCAATTTATAGTGGTAATGCAGGTCGGGTTATGGATTATCTTGGATCTGTTGGATTTGTTCCGGGTTTTAACTTTGTTAATCCTGCTGATTTTCTCCTTGACCTTGCTAATGGCATAGTTGCTGATGTGAAACATGATGATGAGATAGAGAAACATGatcaagatcaagcttcagttAAACAGTCACTAATTTCATCCTATAAGAAAAACTTATACCCTGCTCTTAAAGAAGATATTCAGCAAAACAACACTGAACCATTGGTTTTTCCATCAAGAGGAACGTCTGGACGTTCTTCTGAAAACCAATGGAACACTAGCTGGTGTGAGCAATTCAAGGTTCTGCTCAAGAGGGGTTTACAAGAAAGGAGACATGAATCTTTTTCTGGCTTAAAGATTTTCCAAGTGTTGTCTGTATCCATTCTTTCTGGACTCCTTTGGTGGCACTCAGATCCCTCACACATACAAGATCAGGTAGGACTACTATTCTTCTTCTCGATCTTCTGGGGATTCTTCCCTCTCTTTAATGCAATCTTTGCATTTCCACTTGATAGACCAAtgctaaaaaaagaaagatcatCAGGCATGTACCATCTCTCTTCCTACTATATTGCTAGAATGGTAGGAGACTTACCAATGGAGCTTGTTCTTCCTACAATCTTTGTAACTATAACCTATTGGATGGGTGGTCTTAAGCCTTCTTTAGTTACCTTTGTGTTAACCCTTTTGATCATGCTTTTCAATGTTCTAGTCTCTCAAGGAATAGGCCTAGCACTTGGAGCAATTCTAATGGATGTTAAACAAGCCACAACTCTAGCTTCAGTGACAATGTTGGTTTTTCTTTTAGCTGGTGGTTACTACATTCAGAAAATGCCTTCTTTTATAGCTTGGTTAAAGTACTTTTCTTTCAGTCATTACTGTTATAAGTTGCTTGTAGGGGTGCAGTATTCAGTAAATGAGGTGTATGAATGTAGTCAAGGGTTGCATTGTAGGGTAAGAGATTTTCCAGCCATTAAGTGTTTGGAGATTGGTAATATGTGGGGAGATGTGGCTGCATTGACTGTAATGTTTGTTGGATTCAGAGTTGTTGCATATTTAGCTTTGAGGATTGGACAGCCTAAATGCCGAAGGACTTAA 2061 0.3896 MMPPEQETTINAPNSISPNSNRTENISIHGDPEGSSSNKVKPSLDIDHNAINIPSHPTTPITSFSILPQSLRPITIKFEDVSYSITLTNQKKNGCVLGKESKVTRTILNGVTGIAKPGELTAMLGPSGSGKTTLLTALAGRLTGKVTGTITYNGNSDSSYIKRKIGFVSQDDVVYPHLTVLETLTYTALLRLPKTLTRGEKIEHAERIITELGLTRCRNSPVGGCMGLFRGISGGERKRMSIGQEMLVNPSLLLLDEPTSGLDSTTAQLIVSVLKGLARSGRTIVTTIHQPSSRLYRMFDKVVVLSDGNPIYSGNAGRVMDYLGSVGFVPGFNFVNPADFLLDLANGIVADVKHDDEIEKHDQDQASVKQSLISSYKKNLYPALKEDIQQNNTEPLVFPSRGTSGRSSENQWNTSWCEQFKVLLKRGLQERRHESFSGLKIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRPMLKKERSSGMYHLSSYYIARMVGDLPMELVLPTIFVTITYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQKMPSFIAWLKYFSFSHYCYKLLVGVQYSVNEVYECSQGLHCRVRDFPAIKCLEIGNMWGDVAALTVMFVGFRVVAYLALRIGQPKCRRT 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04073 686 MobiDBLite consensus disorder prediction 1 43 - -
Tsu01g04073 686 Pfam ABC-2 type transporter 289 353 IPR043926 GO:0140359
Tsu01g04073 686 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 76 332 IPR003439 GO:0005524
Tsu01g04073 686 Gene3D - 70 326 IPR027417 -
Tsu01g04073 686 Pfam ABC transporter 109 260 IPR003439 GO:0005524
Tsu01g04073 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 51 679 - -
Tsu01g04073 686 SMART AAA_5 117 309 IPR003593 -
Tsu01g04073 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 326 IPR027417 -
Tsu01g04073 686 MobiDBLite consensus disorder prediction 7 43 - -
Tsu01g04073 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 51 679 - -
Tsu01g04073 686 ProSitePatterns ABC transporters family signature. 232 246 IPR017871 GO:0005524
Tsu01g04073 686 CDD ABCG_EPDR 73 314 - -
Tsu01g04073 686 Pfam ABC-2 type transporter 418 624 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04073 Tsu-Chr1 48613387 48617402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04073 115 315 Calmodulin-binding Proteins AT2G36910 26.087 2.04e-11 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04073 01 48613387 48617402 Tsu01g04073 01 48613387 48617402 ECH